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ONTOLOGY REPORT - ANNOTATIONS


Term:urinary system disease
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Accession:DOID:18 term browser browse the term
Synonyms:primary_id: RDO:9003320
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CAKUT term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmp4 bone morphogenetic protein 4 JBrowse link 15 20,776,060 20,791,013 RGD:13442498
G Bmp7 bone morphogenetic protein 7 JBrowse link 3 170,879,972 170,955,820 RGD:8554872
G Cdc5l cell division cycle 5-like JBrowse link 9 17,949,764 17,988,514 RGD:8554872
G Chd1l chromodomain helicase DNA binding protein 1-like JBrowse link 2 199,714,044 199,792,270 RGD:8554872
G Emc1 ER membrane protein complex subunit 1 JBrowse link 5 157,820,908 157,846,226 RGD:8554872
G Hspa1b heat shock protein family A (Hsp70) member 1B JBrowse link 20 4,877,638 4,880,112 RGD:7242732
G Lifr LIF receptor alpha JBrowse link 2 56,424,910 56,489,346 RGD:8554872
G Ret ret proto-oncogene JBrowse link 4 150,202,170 150,249,196 RGD:8554872
G Six2 SIX homeobox 2 JBrowse link 6 8,952,572 8,955,893 RGD:8554872
CAKUT1 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dstyk dual serine/threonine and tyrosine protein kinase JBrowse link 13 49,195,325 49,243,327 RGD:7240710
RGD:8554872
G Upk3a uroplakin 3A JBrowse link 7 125,920,357 125,925,430 RGD:8554872
CAKUT2 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmp4 bone morphogenetic protein 4 JBrowse link 15 20,776,060 20,791,013 RGD:13446406
G Mmp9 matrix metallopeptidase 9 JBrowse link 3 161,413,410 161,421,473 RGD:13204792
G Tbx18 T-box18 JBrowse link 8 95,359,354 95,387,363 RGD:8554872
RGD:7240710
G Timp1 TIMP metallopeptidase inhibitor 1 JBrowse link X 1,364,771 1,369,451 RGD:13204792
Papillorenal syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pax2 paired box 2 JBrowse link 1 264,493,579 264,585,073 RGD:7240710
RGD:8554872
ureteral obstruction term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase JBrowse link 3 10,041,820 10,145,076 RGD:8693572
G Ace angiotensin I converting enzyme JBrowse link 10 94,170,766 94,213,831 RGD:12880020
G Adamts1 ADAM metallopeptidase with thrombospondin type 1 motif, 1 JBrowse link 11 25,342,119 25,350,938 RGD:9681748
G Adm adrenomedullin JBrowse link 1 175,443,189 175,447,260 RGD:2325637
G Ager advanced glycosylation end product-specific receptor JBrowse link 20 4,363,152 4,366,079 RGD:7243949
G Agt angiotensinogen JBrowse link 19 57,321,594 57,333,460 RGD:11554173
G Akt1 AKT serine/threonine kinase 1 JBrowse link 6 137,218,398 137,239,970 RGD:10041001
G Arg1 arginase 1 JBrowse link 1 21,525,421 21,537,872 RGD:4143282
G Arg2 arginase 2 JBrowse link 6 102,311,097 102,338,406 RGD:4143282
G B2m beta-2 microglobulin JBrowse link 3 114,087,287 114,093,311 RGD:6482685
G Becn1 beclin 1 JBrowse link 10 89,209,944 89,225,297 RGD:11561927
G Cat catalase JBrowse link 3 93,379,872 93,412,058 RGD:5130876
G Ccl11 C-C motif chemokine ligand 11 JBrowse link 10 69,434,965 69,439,566 RGD:7248411
G Cd14 CD14 molecule JBrowse link 18 29,560,341 29,562,290 RGD:7204444
G Cfl1 cofilin 1 JBrowse link 1 220,869,805 220,873,337 RGD:11570413
G Cltrn collectrin, amino acid transport regulator JBrowse link X 32,118,082 32,153,687 RGD:11554173
G Col1a1 collagen type I alpha 1 chain JBrowse link 10 82,745,801 82,762,790 RGD:5688341
G Col1a2 collagen type I alpha 2 chain JBrowse link 4 31,534,225 31,569,152 RGD:5688341
G Col3a1 collagen type III alpha 1 chain JBrowse link 9 52,023,295 52,059,221 RGD:11554173
G Csf1 colony stimulating factor 1 JBrowse link 2 210,522,370 210,550,546 RGD:7257564
RGD:7257574
G Csf1r colony stimulating factor 1 receptor JBrowse link 18 56,414,493 56,458,300 RGD:7257574
G Ctgf connective tissue growth factor JBrowse link 1 21,851,657 21,854,773 RGD:2314607
G Cyp2j4 cytochrome P450, family 2, subfamily j, polypeptide 4 JBrowse link 5 119,546,458 119,564,843 RGD:12904676
G Cyp2j4em1Sage cytochrome P450, family 2, subfamily j, polypeptide 4, ZFN induced mutant 1, Sage RGD:12904676
G Drd1 dopamine receptor D1 JBrowse link 17 11,099,736 11,104,352 RGD:7248457
G Edn1 endothelin 1 JBrowse link 17 22,136,814 22,143,745 RGD:8662268
RGD:11554173
G Fbn1 fibrillin 1 JBrowse link 3 117,569,708 117,766,160 RGD:7365047
G Fn1 fibronectin 1 JBrowse link 9 78,900,111 78,969,018 RGD:7205473
G Gfer growth factor, augmenter of liver regeneration JBrowse link 10 14,059,347 14,061,703 RGD:13506791
G Gja4 gap junction protein, alpha 4 JBrowse link 5 145,374,688 145,377,221 RGD:7207847
G Gja5 gap junction protein, alpha 5 JBrowse link 2 199,162,745 199,184,942 RGD:7207847
G Gjb6 gap junction protein, beta 6 JBrowse link 15 37,400,888 37,411,656 RGD:7207847
G Havcr1 hepatitis A virus cellular receptor 1 JBrowse link 10 31,813,819 31,860,934 RGD:7245953
G Hsd11b2 hydroxysteroid 11-beta dehydrogenase 2 JBrowse link 19 37,476,083 37,481,326 RGD:2308940
G Icam1 intercellular adhesion molecule 1 JBrowse link 8 22,035,287 22,047,049 RGD:11522713
G Ifng interferon gamma JBrowse link 7 61,337,383 61,341,419 RGD:6893456
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:7175301
RGD:7175323
G Il1rn interleukin 1 receptor antagonist JBrowse link 3 1,449,778 1,468,624 RGD:6906925
RGD:6909121
G Irf1 interferon regulatory factor 1 JBrowse link 10 39,109,530 39,116,532 RGD:2317694
G Keap1 Kelch-like ECH-associated protein 1 JBrowse link 8 22,250,518 22,259,868 RGD:5133246
G Lum lumican JBrowse link 7 38,820,058 38,826,862 RGD:2317694
G Mtor mechanistic target of rapamycin kinase JBrowse link 5 165,263,813 165,373,967 RGD:10041001
G Muc20 mucin 20, cell surface associated JBrowse link 11 71,222,602 71,236,223 RGD:7364790
G Nos2 nitric oxide synthase 2 JBrowse link 10 66,188,290 66,221,621 RGD:11554173
G Nos3 nitric oxide synthase 3 JBrowse link 4 7,321,908 7,342,404 RGD:11554173
G Nppa natriuretic peptide A JBrowse link 5 164,808,407 164,809,716 RGD:7247722
RGD:11554173
G Nppb natriuretic peptide B JBrowse link 5 164,796,176 164,797,538 RGD:11554173
G Nppc natriuretic peptide C JBrowse link 9 93,731,436 93,735,636 RGD:11554173
G Npr1 natriuretic peptide receptor 1 JBrowse link 2 189,840,403 189,857,032 RGD:7247722
G Nqo1 NAD(P)H quinone dehydrogenase 1 JBrowse link 19 38,422,210 38,437,103 RGD:5133246
G Pak2 p21 (RAC1) activated kinase 2 JBrowse link 11 72,829,407 72,865,815 RGD:8693572
G Pdgfb platelet derived growth factor subunit B JBrowse link 7 121,215,458 121,233,092 RGD:10449497
G Postn periostin JBrowse link 2 143,656,820 143,688,087 RGD:10040972
G Relb RELB proto-oncogene, NF-kB subunit JBrowse link 1 80,517,081 80,545,019 RGD:7777163
G Romo1 reactive oxygen species modulator 1 JBrowse link 3 151,688,213 151,689,813 RGD:13463462
G Serpine1 serpin family E member 1 JBrowse link 12 22,641,104 22,651,482 RGD:8547941
RGD:8547912
G Shh sonic hedgehog JBrowse link 4 718,538 727,691 RGD:12859047
G Skil SKI-like proto-oncogene JBrowse link 2 115,862,932 115,891,304 RGD:2308888
G Tgfb1 transforming growth factor, beta 1 JBrowse link 1 82,480,875 82,497,196 RGD:11554173
G Tgfb2 transforming growth factor, beta 2 JBrowse link 13 105,039,639 105,142,010 RGD:11554173
G Tlr9 toll-like receptor 9 JBrowse link 8 114,916,122 114,920,171 RGD:7246895
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:7245519
G Tnfrsf11b TNF receptor superfamily member 11B JBrowse link 7 93,798,580 93,826,586 RGD:7205482
G Tnfrsf1a TNF receptor superfamily member 1A JBrowse link 4 157,864,905 157,877,634 RGD:7245519
G Tnfrsf1b TNF receptor superfamily member 1B JBrowse link 5 163,136,390 163,167,299 RGD:7245519
RGD:7245536
Urethral Obstruction term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cyp19a1 cytochrome P450, family 19, subfamily a, polypeptide 1 JBrowse link 8 58,744,849 58,772,408 RGD:7257713
G Gja1 gap junction protein, alpha 1 JBrowse link 20 37,876,650 37,889,097 RGD:11568666
G Gjb2 gap junction protein, beta 2 JBrowse link 15 37,377,313 37,394,494 RGD:11568666
G Mapk1 mitogen activated protein kinase 1 JBrowse link 11 88,203,863 88,273,301 RGD:7244171
G Nos1 nitric oxide synthase 1 JBrowse link 12 44,214,949 44,405,530 RGD:7257604
G Tgfb1 transforming growth factor, beta 1 JBrowse link 1 82,480,875 82,497,196 RGD:7394856
urinary bladder neck obstruction term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adra1a adrenoceptor alpha 1A JBrowse link 15 43,296,997 43,398,314 RGD:5688368
G Col1a1 collagen type I alpha 1 chain JBrowse link 10 82,745,801 82,762,790 RGD:7257549
G Col3a1 collagen type III alpha 1 chain JBrowse link 9 52,023,295 52,059,221 RGD:7257549
G Cyp19a1 cytochrome P450, family 19, subfamily a, polypeptide 1 JBrowse link 8 58,744,849 58,772,408 RGD:7257709
G Eln elastin JBrowse link 12 24,978,478 25,021,864 RGD:7257549
G Hif1a hypoxia inducible factor 1 alpha subunit JBrowse link 6 96,810,868 96,856,303 RGD:9068887
G Htr2a 5-hydroxytryptamine receptor 2A JBrowse link 15 56,666,152 56,732,469 RGD:7257660
G Mmp7 matrix metallopeptidase 7 JBrowse link 8 5,893,253 5,900,965 RGD:7257549
G Ngf nerve growth factor JBrowse link 2 204,886,158 204,939,523 RGD:7242774
G Nos3 nitric oxide synthase 3 JBrowse link 4 7,321,908 7,342,404 RGD:4891960
G Optn optineurin JBrowse link 17 77,167,700 77,218,374 RGD:7775024
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link 13 67,351,230 67,356,920 RGD:11554173
G Sod2 superoxide dismutase 2 JBrowse link 1 47,914,757 47,921,587 RGD:7175518

Term paths to the root
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Term Annotations click to browse term
  Disease 13576
    urinary system disease 95
      CAKUT + 15
      urinary system benign neoplasm + 0
      urinary tract obstruction + 84
paths to the root