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ONTOLOGY REPORT - ANNOTATIONS


Term:pigmentation phenotype
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Accession:MP:0001186 term browser browse the term
Definition:the observable morphological and physiological characteristics of mammalian organisms that are manifested through the deposition or aggregation of coloring matter in any tissue or cell of the organism


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pigmentation phenotype term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lyst lysosomal trafficking regulator JBrowse link 17 90,323,055 90,522,091 RGD:1302441
G Myo5a myosin VA JBrowse link 8 82,038,966 82,156,507 RGD:61493
abnormal coat/hair pigmentation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atrn attractin JBrowse link 3 123,434,409 123,567,922 RGD:67998
G Ednrb endothelin receptor type B JBrowse link 15 88,004,775 88,036,354 RGD:628515
G Ednrbsl endothelin receptor type B, spotting lethal RGD:628515
abnormal retinal pigmentation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Crb1 crumbs 1, cell polarity complex component JBrowse link 13 56,270,519 56,462,893 RGD:13451131
G Crb1m1 crumbs 1, cell polarity complex component;mutant 1 RGD:13451131
absent coat pigmentation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tyr tyrosinase JBrowse link 1 151,012,598 151,106,802 RGD:12792973
RGD:1599687
G Tyrem1Kyo tyrosinase; TALEN induced mutant1, Kyo RGD:12792973
belly spot term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Kit KIT proto-oncogene receptor tyrosine kinase JBrowse link 14 35,072,131 35,149,638 RGD:5133424
G KitWs KIT proto-oncogene receptor tyrosine kinase; mutant 1 RGD:5133424
diluted coat color term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Kit KIT proto-oncogene receptor tyrosine kinase JBrowse link 14 35,072,131 35,149,638 RGD:5133424
G KitWs KIT proto-oncogene receptor tyrosine kinase; mutant 1 RGD:5133424
G Rab38 RAB38, member RAS oncogene family JBrowse link 1 152,072,716 152,153,449 RGD:1300411
G Rab38ru Rab38, member of RAS oncogene family, ruby allele RGD:1300411
hypopigmentation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ednrb endothelin receptor type B JBrowse link 15 88,004,775 88,036,354 RGD:6480217
ocular albinism term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Oca2 OCA2 melanosomal transmembrane protein JBrowse link 1 114,661,970 114,987,433 RGD:1579834

Term paths to the root
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Term Annotations click to browse term
  mammalian phenotype 4994
    pigmentation phenotype 45
      abnormal coat/hair pigmentation + 30
      abnormal extracutaneous pigmentation + 11
      abnormal horn pigmentation 0
      abnormal melanocyte morphology + 0
      abnormal melanocyte proliferation 0
      abnormal melanogenesis + 0
      abnormal melanosome transport 0
      abnormal pigmentation pattern 0
      abnormal scrotum pigmentation 0
      abnormal skin pigmentation + 0
      hyperpigmentation + 0
      hypopigmentation + 3
      lipofuscinosis 0
paths to the root