chr start stop reference nuc variant nuc depth genic status zygosity variant ID 3 138973399 138973400 T C 34 INTERGENIC homozygous 774821422 3 138973475 138973476 T C 38 INTERGENIC homozygous 774821423 3 138973720 138973721 G A 48 INTERGENIC homozygous 774821424