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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:scyllo-inositol
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Accession:CHEBI:10642 term browser browse the term
Definition:An inositol that has formula C6H12O6.
Synonyms:related_synonym: (1r,2r,3r,4r,5r,6r)-cyclohexane-1,2,3,4,5,6-hexol;   1,3,5/2,4,6-cyclohexanehexol;   Cocositol;   Formula=C6H12O6;   InChI=1S/C6H12O6/c7-1-2(8)4(10)6(12)5(11)3(1)9/h1-12H/t1-,2-,3+,4+,5-,6-;   InChIKey=CDAISMWEOUEBRE-CDRYSYESSA-N;   Quercinitol;   SMILES=O[C@H]1[C@H](O)[C@@H](O)[C@H](O)[C@@H](O)[C@@H]1O;   Scyllitol
 alt_id: CHEBI:26614
 xref: Beilstein:2206312;   CAS:488-59-5;   Gmelin:561300;   KEGG:C06153;   PMID:24352657;   Reaxys:2206312


show annotations for term's descendants           Sort by:
 
isepamicin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pgd phosphogluconate dehydrogenase decreases activity EXP isepamicin results in decreased activity of PGD protein CTD PMID:15558954 NCBI chr 5:165,966,128...165,982,327 JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel increases expression ISO isepamicin results in increased expression of PKD2 protein mutant form CTD PMID:15001556 NCBI chr14:6,602,004...6,645,257
Ensembl chr14:6,602,004...6,645,257
JBrowse link
netilmycin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pgd phosphogluconate dehydrogenase decreases activity EXP Netilmicin results in decreased activity of PGD protein CTD PMID:15558954 NCBI chr 5:165,966,128...165,982,327 JBrowse link
paromomycin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase increases expression ISO Paromomycin results in increased expression of ATM protein mutant form CTD PMID:15498871 NCBI chr 8:58,015,938...58,119,973
Ensembl chr 8:58,015,940...58,120,045
JBrowse link
streptomycin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxb9 homeo box B9 multiple interactions ISO [Penicillins co-treated with Streptomycin] results in increased expression of HOXB9 mRNA CTD PMID:31711903 NCBI chr10:84,119,772...84,124,963
Ensembl chr10:84,119,884...84,123,390
JBrowse link
G Pax3 paired box 3 multiple interactions ISO [Penicillins co-treated with Streptomycin] results in increased expression of PAX3 mRNA CTD PMID:31711903 NCBI chr 9:84,004,004...84,101,226
Ensembl chr 9:84,005,183...84,101,172
JBrowse link
G Tcf15 transcription factor 15 multiple interactions ISO [Penicillins co-treated with Streptomycin] results in increased expression of TCF15 mRNA CTD PMID:31711903 NCBI chr 3:147,643,250...147,649,511
Ensembl chr 3:147,643,250...147,649,504
JBrowse link
G Tnf tumor necrosis factor multiple interactions ISO Streptomycin inhibits the reaction [Lipopolysaccharides results in increased expression of TNF protein] CTD PMID:17699551 NCBI chr20:5,189,382...5,192,000
Ensembl chr20:5,189,390...5,192,000
JBrowse link
G Uncx UNC homeobox multiple interactions ISO [Penicillins co-treated with Streptomycin] results in increased expression of UNCX mRNA CTD PMID:31711903 NCBI chr12:17,182,158...17,186,679
Ensembl chr12:17,182,163...17,186,679
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19816
    role 19764
      biological role 19764
        biochemical role 19313
          metabolite 19294
            eukaryotic metabolite 18943
              animal metabolite 18747
                mammalian metabolite 18746
                  human metabolite 18254
                    scyllo-inositol 8
                      1-amino-1-deoxy-scyllo-inositol 0
                      1-guanidino-1-deoxy-scyllo-inositol 0
                      1D-1-guanidino-1-deoxy-3-dehydro-scyllo-inositol 0
                      1D-3-amino-1-guanidino-1,3-dideoxy-scyllo-inositol 0
                      1D-3-amino-1-guanidino-1,3-dideoxy-scyllo-inositol 4-phosphate 0
                      1D-3-amino-1-guanidino-1,3-dideoxy-scyllo-inositol 6-phosphate 0
                      2,4,6/3,5-pentahydroxycyclohexanone 0
                      2-deoxy-scyllo-inosamine 0
                      2-deoxy-scyllo-inosose 0
                      3-amino-2,3-dideoxy-scyllo-inosose 0
                      3-dehydro-scyllo-inosose 0
                      streptamine + 3
                      streptidine + 5
Path 2
Term Annotations click to browse term
  CHEBI ontology 19816
    subatomic particle 19814
      composite particle 19814
        hadron 19814
          baryon 19814
            nucleon 19814
              atomic nucleus 19814
                atom 19814
                  main group element atom 19702
                    p-block element atom 19702
                      chalcogen 19399
                        oxygen atom 19361
                          oxygen molecular entity 19361
                            hydroxides 19107
                              organic hydroxy compound 18661
                                polyol 7807
                                  cyclitol 2451
                                    inositol 41
                                      scyllo-inositol 8
                                        1-amino-1-deoxy-scyllo-inositol 0
                                        1-guanidino-1-deoxy-scyllo-inositol 0
                                        1D-1-guanidino-1-deoxy-3-dehydro-scyllo-inositol 0
                                        1D-3-amino-1-guanidino-1,3-dideoxy-scyllo-inositol 0
                                        1D-3-amino-1-guanidino-1,3-dideoxy-scyllo-inositol 4-phosphate 0
                                        1D-3-amino-1-guanidino-1,3-dideoxy-scyllo-inositol 6-phosphate 0
                                        2,4,6/3,5-pentahydroxycyclohexanone 0
                                        2-deoxy-scyllo-inosamine 0
                                        2-deoxy-scyllo-inosose 0
                                        3-amino-2,3-dideoxy-scyllo-inosose 0
                                        3-dehydro-scyllo-inosose 0
                                        streptamine + 3
                                        streptidine + 5
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.