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ONTOLOGY REPORT - ANNOTATIONS


Term:P-\{alpha-D-GlcpNAc-(1->3)-[D-GroA-(2->1)]-alpha-D-GlcpNAc-6-yl\}-alpha-D-GlcpNAc-(1->3)-[D-GroA-(2->1)]-alpha-D-GlcpNAc-P-6-[CH2]5NHC(=O)[CH2]4C(=O)NHR group
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Accession:CHEBI:134203 term browser browse the term
Definition:An organic group derived from alpha-D-GlcpNAc-(1->3)-[P-6-[CH2]5NH2]-alpha-D-GlcpNAc-(1->2)-D-GroA (CHEBI:134201) in which the 5-aminopentyl linker is replaced by a 6-(pentylamino)hexanamido one. When linked to the diphtheria toxin mutant 197CRM, it shows potential as a Clostridium difficile vaccine candidate.
Synonyms:exact_synonym: (1-{(2R,3S,4R,5R,6R)-5-acetamido-4-{[(2S,3R,4R,5S,6R)-3-acetamido-6-({[({(2R,3S,4R,5R,6R)-5-acetamido-4-{[(2S,3R,4R,5S,6R)-3-acetamido-4,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-6-[(1R)-1-carboxy-2-hydroxyethoxy]-3-hydroxyoxan-2-yl}methoxy)(hydroxy)phosphoryl]oxy}methyl)-4,5-dihydroxyoxan-2-yl]oxy}-6-[(1R)-1-carboxy-2-hydroxyethoxy]-3-hydroxyoxan-2-yl}-3-hydroxy-3,11,16-trioxo-2,4-dioxa-10-aza-3lambda(5)-phosphahexadecan-16-yl)amino
 related_synonym: Formula=C49H83N6O35P2R;   SMILES=[C@H]1([C@@H]([C@H]([C@@H]([C@H](O1)COP(OC[C@H]2O[C@@H]([C@@H]([C@H]([C@@H]2O)O[C@@H]3[C@@H]([C@H]([C@@H]([C@H](O3)CO)O)O)NC(=O)C)NC(=O)C)O[C@H](CO)C(O)=O)(=O)O)O)O)NC(=O)C)O[C@@H]4[C@H]([C@H](O[C@@H]([C@H]4O)COP(=O)(OCCCCCNC(CCCCC(N*)=O)=O)O)O[C@H](CO)C(O)=O)NC(=O)C;   alpha-D-GlcpNAc-(1->3)-[D-GroA-(2->1)]-alpha-D-GlcpNAc-6P3-alpha-D-GlcpNAc-(1->3)-[D-GroA-(2->1)]-alpha-D-GlcpNAc-6P[CH2]5NH2NHC(=O)[CH2]4C(=O)NHR
 xref: PMID:27524293 "Europe PMC"


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  CHEBI ontology 19669
    chemical entity 19667
      group 19582
        organic group 18343
          P-\{alpha-D-GlcpNAc-(1->3)-[D-GroA-(2->1)]-alpha-D-GlcpNAc-6-yl\}-alpha-D-GlcpNAc-(1->3)-[D-GroA-(2->1)]-alpha-D-GlcpNAc-P-6-[CH2]5NHC(=O)[CH2]4C(=O)NHR group 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19669
    subatomic particle 19665
      composite particle 19665
        hadron 19665
          baryon 19665
            nucleon 19665
              atomic nucleus 19665
                atom 19665
                  main group element atom 19545
                    p-block element atom 19545
                      carbon group element atom 19428
                        carbon atom 19420
                          organic molecular entity 19420
                            organic group 18343
                              organic divalent group 18334
                                organodiyl group 18334
                                  carbonyl group 18222
                                    carbonyl compound 18222
                                      carboxylic acid 17923
                                        monocarboxylic acid 17256
                                          fatty acid 15814
                                            saturated fatty acid 15782
                                              propionic acid 3641
                                                glyceric acid 6
                                                  D-glyceric acid 5
                                                    P-\{alpha-D-GlcpNAc-(1->3)-[D-GroA-(2->1)]-alpha-D-GlcpNAc-6-yl\}-alpha-D-GlcpNAc-(1->3)-[P-6-[CH2]5NH2]-alpha-D-GlcpNAc-(1->2)-D-GroA 0
                                                      P-\{alpha-D-GlcpNAc-(1->3)-[D-GroA-(2->1)]-alpha-D-GlcpNAc-6-yl\}-alpha-D-GlcpNAc-(1->3)-[D-GroA-(2->1)]-alpha-D-GlcpNAc-P-6-[CH2]5NHC(=O)[CH2]4C(=O)NHR group 0
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