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ONTOLOGY REPORT - ANNOTATIONS


Term:all-trans-18-hydroxyretinoate
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Accession:CHEBI:139258 term browser browse the term
Definition:A retinoid anion that is the conjugate base of all-trans-18-hydroxyretinoic acid, obtained by deprotonation of the carboxy group; major species at pH 7.3.
Synonyms:exact_synonym: (2E,4E,6E,8E)-9-[2-(hydroxymethyl)-6,6-dimethylcyclohex-1-en-1-yl]-3,7-dimethylnona-2,4,6,8-tetraenoate
 related_synonym: 18-hydroxy-all-trans-retinoate;   18-hydroxyretinoate;   Formula=C20H27O3;   InChI=1S/C20H28O3/c1-15(7-5-8-16(2)13-19(22)23)10-11-18-17(14-21)9-6-12-20(18,3)4/h5,7-8,10-11,13,21H,6,9,12,14H2,1-4H3,(H,22,23)/p-1/b8-5+,11-10+,15-7+,16-13+;   InChIKey=XSJOIRFEYHJNAW-FCKHSPHMSA-M;   SMILES=C1(C)(C)CCCC(=C1\\C=C\\C(=C\\C=C\\C(=C\\C(=O)[O-])\\C)\\C)CO
 xref: PMID:22020119
 cyclic_relationship: is_conjugate_base_of CHEBI:80657


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Term Annotations click to browse term
  CHEBI ontology 21260
    chemical entity 21258
      molecular entity 21251
        ion 16485
          anion 15318
            organic anion 2807
              carboxylic acid anion 2427
                retinoid anion 0
                  all-trans-18-hydroxyretinoate 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 21260
    subatomic particle 21256
      composite particle 21256
        hadron 21256
          baryon 21256
            nucleon 21256
              atomic nucleus 21256
                atom 21256
                  main group element atom 21122
                    p-block element atom 21122
                      carbon group element atom 20893
                        carbon atom 20784
                          organic molecular entity 20784
                            organic ion 8337
                              organic anion 2807
                                carboxylic acid anion 2427
                                  monocarboxylic acid anion 1503
                                    hydroxy monocarboxylic acid anion 59
                                      all-trans-18-hydroxyretinoate 0
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.