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ONTOLOGY REPORT - ANNOTATIONS


Term:all-trans-4-oxoretinal
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Accession:CHEBI:139347 term browser browse the term
Definition:A retinoid that is all-trans-retinal carrying an oxo substituent at position 4 on the cyclohexenyl ring.
Synonyms:exact_synonym: (2E,4E,6E,8E)-3,7-dimethyl-9-(2,6,6-trimethyl-3-oxocyclohex-1-en-1-yl)nona-2,4,6,8-tetraenal
 related_synonym: 4-Oxoretinaldehyde;   4-ketoretinal;   4-oxoretinal;   Formula=C20H26O2;   InChI=1S/C20H26O2/c1-15(7-6-8-16(2)12-14-21)9-10-18-17(3)19(22)11-13-20(18,4)5/h6-10,12,14H,11,13H2,1-5H3/b8-6+,10-9+,15-7+,16-12+;   InChIKey=PLILDISEFZJECC-RMWYGNQTSA-N;   SMILES=C1(C)(C)C(\\C=C\\C(=C\\C=C\\C(=C\\C(=O)[H])\\C)\\C)=C(C)C(CC1)=O;   all-trans-4-ketoretinal;   all-trans-4-oxo-retinal
 xref: CAS:33532-44-4 "ChemIDplus"
 xref_mesh: MESH:C099660
 xref: PMID:10415093 "Europe PMC";   PMID:12528465 "Europe PMC";   PMID:15369820 "SUBMITTER";   PMID:1775535 "Europe PMC";   PMID:17943179 "Europe PMC";   PMID:8643496 "Europe PMC";   Reaxys:2508352 "Reaxys"


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all-trans-4-oxoretinal term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akr1b1 aldo-keto reductase family 1 member B JBrowse link 4 61,706,866 61,720,959 RGD:6480464
G Akr1b10 aldo-keto reductase family 1 member B10 JBrowse link 4 61,813,265 61,830,371 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19669
    role 19613
      biological role 19611
        inhibitor 18059
          gap junctional intercellular communication inhibitor 33
            all-trans-retinal 33
              all-trans-4-oxoretinal 2
Path 2
Term Annotations click to browse term
  CHEBI ontology 19669
    subatomic particle 19665
      composite particle 19665
        hadron 19665
          baryon 19665
            nucleon 19665
              atomic nucleus 19665
                atom 19665
                  main group element atom 19545
                    p-block element atom 19545
                      carbon group element atom 19428
                        carbon atom 19420
                          organic molecular entity 19420
                            organic group 18343
                              organic divalent group 18334
                                organodiyl group 18334
                                  carbonyl group 18222
                                    carbonyl compound 18222
                                      carboxylic acid 17923
                                        carboacyl group 16943
                                          univalent carboacyl group 16943
                                            formyl group 7679
                                              aldehyde 7679
                                                alpha,beta-unsaturated aldehyde 1171
                                                  enal 1171
                                                    retinal 39
                                                      all-trans-retinal 33
                                                        all-trans-4-oxoretinal 2
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