Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:(20S)-ginsenoside Rh1
go back to main search page
Accession:CHEBI:142487 term browser browse the term
Definition:A tetracyclic triterpenoid that is (20S)-protopanaxadiol which is substituted by beta-D-glucoside at the 6alpha position.
Synonyms:exact_synonym: (3beta,6alpha,12beta)-3,12,20-trihydroxydammar-24-en-6-yl beta-D-glucopyranoside
 related_synonym: Formula=C36H62O9;   InChI=1S/C36H62O9/c1-19(2)10-9-13-36(8,43)20-11-15-34(6)26(20)21(38)16-24-33(5)14-12-25(39)32(3,4)30(33)22(17-35(24,34)7)44-31-29(42)28(41)27(40)23(18-37)45-31/h10,20-31,37-43H,9,11-18H2,1-8H3/t20-,21+,22-,23+,24+,25-,26-,27+,28-,29+,30-,31+,33+,34+,35+,36-/m0/s1;   InChIKey=RAQNTCRNSXYLAH-RFCGZQMISA-N;   SMILES=[C@]12([C@]3([C@]([H])([C@@H](C[C@]2([H])[C@@]4([C@@]([H])([C@H](C1)O[C@@H]5O[C@@H]([C@H]([C@@H]([C@H]5O)O)O)CO)C([C@H](CC4)O)(C)C)C)O)[C@]([H])(CC3)[C@](CCC=C(C)C)(O)C)C)C
 xref: CAS:63223-86-9 "ChemIDplus";   CAS:63223-86-9 "KNApSAcK";   FooDB:FDB019175;   HMDB:HMDB0039554;   KNApSAcK:C00030402
 xref_mesh: MESH:C425564
 xref: MetaCyc:CPD-15446;   PMID:11210151 "Europe PMC";   PMID:11325227 "Europe PMC";   PMID:16651785 "Europe PMC";   PMID:19781603 "Europe PMC";   PMID:20686271 "Europe PMC";   PMID:23291557 "Europe PMC";   PMID:26032089 "SUBMITTER";   PMID:26200131 "Europe PMC";   PMID:29329463 "Europe PMC";   Reaxys:5786038 "Reaxys"


show annotations for term's descendants       view all columns           Sort by:
 
(20S)-ginsenoside Rh1 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fos Fos proto-oncogene, AP-1 transcription factor subunit JBrowse link 6 109,300,433 109,303,299 RGD:6480464
G Icam1 intercellular adhesion molecule 1 JBrowse link 8 22,035,287 22,047,049 RGD:6480464
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:6480464
G Il4 interleukin 4 JBrowse link 10 38,963,979 38,969,531 RGD:6480464
G Il6 interleukin 6 JBrowse link 4 3,043,231 3,047,807 RGD:6480464
G Itga4 integrin subunit alpha 4 JBrowse link 3 66,178,745 66,265,547 RGD:6480464
G Itgal integrin subunit alpha L JBrowse link 1 198,744,053 198,781,745 RGD:6480464
G Itgb1 integrin subunit beta 1 JBrowse link 19 61,677,512 61,725,537 RGD:6480464
G Itgb2 integrin subunit beta 2 JBrowse link 20 11,777,773 11,815,647 RGD:6480464
G Jun Jun proto-oncogene, AP-1 transcription factor subunit JBrowse link 5 114,011,184 114,014,277 RGD:6480464
G Lpl lipoprotein lipase JBrowse link 16 22,537,687 22,561,487 RGD:6480464
G Pgr progesterone receptor JBrowse link 8 7,128,656 7,187,796 RGD:6480464
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link 13 67,351,230 67,356,920 RGD:6480464
G Sele selectin E JBrowse link 13 82,355,234 82,365,323 RGD:6480464
G Tff1 trefoil factor 1 JBrowse link 20 9,892,124 9,895,984 RGD:6480464
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:6480464
G Vcam1 vascular cell adhesion molecule 1 JBrowse link 2 219,071,193 219,090,931 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19728
    role 19675
      biological role 19673
        epitope 6769
          beta-D-glucose 1585
            beta-D-glucoside 1389
              (20S)-ginsenoside Rh1 17
Path 2
Term Annotations click to browse term
  CHEBI ontology 19728
    subatomic particle 19724
      composite particle 19724
        hadron 19724
          baryon 19724
            nucleon 19724
              atomic nucleus 19724
                atom 19724
                  main group element atom 19610
                    p-block element atom 19610
                      carbon group element atom 19501
                        carbon atom 19494
                          organic molecular entity 19494
                            heteroorganic entity 19055
                              organochalcogen compound 18781
                                organooxygen compound 18694
                                  carbohydrates and carbohydrate derivatives 12101
                                    carbohydrate 12101
                                      monosaccharide 3926
                                        aldose 2429
                                          aldohexose 2069
                                            glucose 2029
                                              D-glucose 2029
                                                D-glucopyranose 1609
                                                  beta-D-glucose 1585
                                                    beta-D-glucoside 1389
                                                      (20S)-ginsenoside Rh1 17
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.