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ONTOLOGY REPORT - ANNOTATIONS


Term:2'-deoxycytidine
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Accession:CHEBI:15698 term browser browse the term
Definition:A pyrimidine 2'-deoxyribonucleoside having cytosine as the nucleobase.
Synonyms:related_synonym: 4-amino-1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)tetrahydrofuran-2-yl]pyrimidin-2(1H)-one;   Deoxycytidine;   Formula=C9H13N3O4;   InChI=1S/C9H13N3O4/c10-7-1-2-12(9(15)11-7)8-3-5(14)6(4-13)16-8/h1-2,5-6,8,13-14H,3-4H2,(H2,10,11,15)/t5-,6+,8+/m0/s1;   InChIKey=CKTSBUTUHBMZGZ-SHYZEUOFSA-N;   SMILES=Nc1ccn([C@H]2C[C@H](O)[C@@H](CO)O2)c(=O)n1;   dC;   dCYD
 alt_id: CHEBI:19240;   CHEBI:41417;   CHEBI:41430;   CHEBI:41806;   CHEBI:4407
 xref: Beilstein:87567 "Beilstein";   CAS:951-77-9 "ChemIDplus";   CAS:951-77-9 "KEGG COMPOUND";   CAS:951-77-9 "NIST Chemistry WebBook";   DrugBank:DB02594;   Gmelin:1321747 "Gmelin";   HMDB:HMDB0000014;   KEGG:C00881
 xref_mesh: MESH:D003841
 xref: MetaCyc:DEOXYCYTIDINE;   PDBeChem:DCZ;   PMID:15778433 "Europe PMC";   Reaxys:87567 "Reaxys";   Wikipedia:Deoxycytidine


show annotations for term's descendants       view all columns           Sort by:
 
2'-deoxycytidine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Casp3 caspase 3 JBrowse link 16 48,845,011 48,863,249 RGD:6480464
G Dck deoxycytidine kinase JBrowse link 14 20,935,442 20,952,939 RGD:6480464
G Slc28a1 solute carrier family 28 member 1 JBrowse link 1 142,948,942 142,992,410 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19669
    role 19613
      biological role 19611
        biochemical role 19138
          metabolite 19106
            eukaryotic metabolite 18748
              fungal metabolite 17354
                Saccharomyces cerevisiae metabolite 16364
                  2'-deoxycytidine 3
                    5-methyl-2'-deoxycytidine 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19669
    subatomic particle 19665
      composite particle 19665
        hadron 19665
          baryon 19665
            nucleon 19665
              atomic nucleus 19665
                atom 19665
                  main group element atom 19545
                    p-block element atom 19545
                      carbon group element atom 19428
                        carbon atom 19420
                          organic molecular entity 19420
                            heteroorganic entity 19003
                              organochalcogen compound 18718
                                organooxygen compound 18629
                                  carbohydrates and carbohydrate derivatives 11703
                                    carbohydrate 11703
                                      carbohydrate derivative 11314
                                        glycosyl compound 10294
                                          N-glycosyl compound 4200
                                            nucleoside 4023
                                              deoxyribonucleoside 982
                                                2'-deoxyribonucleoside 310
                                                  pyrimidine 2'-deoxyribonucleoside 295
                                                    2'-deoxycytidine 3
                                                      5-methyl-2'-deoxycytidine 0
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.