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ONTOLOGY REPORT - ANNOTATIONS


Term:loganin
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Accession:CHEBI:15771 term browser browse the term
Definition:An iridoid monoterpenoid with formula C17H26O10 that is isolated from several plant species and exhibits neuroprotective and anti-inflammatory properties.
Synonyms:exact_synonym: methyl (1S,4aS,6S,7R,7aS)-1-(beta-D-glucopyranosyloxy)-6-hydroxy-7-methyl-1,4a,5,6,7,7a-hexahydrocyclopenta[c]pyran-4-carboxylate
 related_synonym: 1-(beta-D-glucopyranosyloxy)-1,4a,5,6,7,7a-hexahydro-6-hydroxy-7-methylcyclopenta[c]pyran-4-carboxylic acid methyl ester;   Formula=C17H26O10;   InChI=1S/C17H26O10/c1-6-9(19)3-7-8(15(23)24-2)5-25-16(11(6)7)27-17-14(22)13(21)12(20)10(4-18)26-17/h5-7,9-14,16-22H,3-4H2,1-2H3/t6-,7+,9-,10+,11+,12+,13-,14+,16-,17-/m0/s1;   InChIKey=AMBQHHVBBHTQBF-UOUCRYGSSA-N;   SMILES=[H][C@]12C[C@H](O)[C@H](C)[C@@]1([H])[C@@H](OC=C2C(=O)OC)O[C@@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@H]1O;   loganoside
 alt_id: CHEBI:132709;   CHEBI:14525;   CHEBI:25069;   CHEBI:6513
 xref: AGR:IND500719365;   CAS:18524-94-2;   KEGG:C01433;   KNApSAcK:C00003088;   LIPID_MAPS_instance:LMPR0102070001
 xref_mesh: MESH:C059516
 xref: MetaCyc:LOGANIN;   PMID:19666019;   PMID:22931211;   PMID:25778782;   PMID:26231452;   PMID:26287995;   PMID:26407655;   PMID:26591537;   PMID:26619955;   PMID:26720701;   PMID:27106028;   PMID:27128898;   PMID:27155393;   PMID:27241020;   PMID:27416474;   PMID:27446632;   PMID:27534097;   PMID:27662601;   PMID:27710888;   PMID:27739659;   Pubchem:91727262;   Reaxys:55724;   Wikipedia:Loganin


show annotations for term's descendants       view all columns           Sort by:
 
loganin term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ache acetylcholinesterase JBrowse link 12 22,472,358 22,477,052 RGD:6480464
G Ccl2 C-C motif chemokine ligand 2 JBrowse link 10 69,412,065 69,413,863 RGD:6480464
G Cyba cytochrome b-245 alpha chain JBrowse link 19 55,249,634 55,257,824 RGD:6480464
G Hmox1 heme oxygenase 1 JBrowse link 19 14,508,634 14,515,455 RGD:6480464
G Lep leptin JBrowse link 4 56,337,695 56,351,818 RGD:6480464
G Nfe2l2 nuclear factor, erythroid 2-like 2 JBrowse link 3 62,497,568 62,525,146 RGD:6480464
G Nos2 nitric oxide synthase 2 JBrowse link 10 66,188,290 66,221,621 RGD:6480464
G Nox4 NADPH oxidase 4 JBrowse link 1 150,796,359 150,976,186 RGD:6480464
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link 13 67,351,230 67,356,920 RGD:6480464
G Rela RELA proto-oncogene, NF-kB subunit JBrowse link 1 220,992,770 221,003,249 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19770
    role 19717
      application 19363
        anti-inflammatory agent 14954
          loganin 10
            7-deoxyloganin + 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19770
    subatomic particle 19768
      composite particle 19768
        hadron 19768
          baryon 19768
            nucleon 19768
              atomic nucleus 19768
                atom 19768
                  main group element atom 19655
                    p-block element atom 19655
                      carbon group element atom 19548
                        carbon atom 19537
                          organic molecular entity 19537
                            heteroorganic entity 19129
                              organochalcogen compound 18828
                                organooxygen compound 18747
                                  carbohydrates and carbohydrate derivatives 12146
                                    carbohydrate 12146
                                      monosaccharide 4019
                                        aldose 2534
                                          aldohexose 2180
                                            glucose 2141
                                              D-glucose 2141
                                                D-glucopyranose 1703
                                                  beta-D-glucose 1594
                                                    beta-D-glucoside 1400
                                                      loganin 10
                                                        7-deoxyloganin + 0
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.