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ONTOLOGY REPORT - ANNOTATIONS


Term:formamide
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Accession:CHEBI:16397 term browser browse the term
Definition:The simplest monocarboxylic acid amide, obtained by formal condensation of formic acid with ammonia. The parent of the class of formaldehydes.
Synonyms:related_synonym: Ameisensaeureamid;   Formamid;   Formula=CH3NO;   InChI=1S/CH3NO/c2-1-3/h1H,(H2,2,3);   InChIKey=ZHNUHDYFZUAESO-UHFFFAOYSA-N;   Methanamid;   Methanamide;   SMILES=[H]C(N)=O;   carbamaldehyde;   formimidic acid
 alt_id: CHEBI:14275;   CHEBI:24078;   CHEBI:40895;   CHEBI:5143
 xref: Beilstein:505995 "Beilstein";   CAS:75-12-7 "ChemIDplus";   CAS:75-12-7 "KEGG COMPOUND";   CAS:75-12-7 "NIST Chemistry WebBook";   Gmelin:824 "Gmelin";   HMDB:HMDB0001536;   KEGG:C00488
 xref_mesh: MESH:C031066
 xref: MetaCyc:FORMAMIDE;   PDBeChem:ARF;   PMID:11282235 "Europe PMC";   PMID:11545392 "Europe PMC";   PMID:12115814 "Europe PMC";   PMID:14750843 "Europe PMC";   PMID:15082074 "Europe PMC";   PMID:17184725 "Europe PMC";   PMID:19334838 "Europe PMC";   PMID:21215846 "Europe PMC";   PMID:21229996 "Europe PMC";   PMID:21573300 "Europe PMC";   PMID:21647491 "Europe PMC";   PMID:21647492 "Europe PMC";   PMID:21769603 "Europe PMC";   PMID:21932847 "Europe PMC";   Reaxys:505995 "Reaxys";   UM-BBD_compID:c0796 "UM-BBD";   Wikipedia:Formamide
 cyclic_relationship: is_tautomer_of CHEBI:48431


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formamide term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc14a1 solute carrier family 14 member 1 (Kidd blood group) JBrowse link 18 74,461,064 74,504,475 RGD:6480464
N,N-dimethylformamide term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcb1b ATP-binding cassette, subfamily B (MDR/TAP), member 1B JBrowse link 4 22,225,123 22,307,577 RGD:6480464
G Bax BCL2 associated X, apoptosis regulator JBrowse link 1 101,451,801 101,457,207 RGD:6480464
G Bcl2l1 Bcl2-like 1 JBrowse link 3 148,259,594 148,314,191 RGD:6480464
G Casp3 caspase 3 JBrowse link 16 48,845,011 48,863,249 RGD:6480464
G Casp9 caspase 9 JBrowse link 5 160,356,211 160,373,774 RGD:6480464
G Cat catalase JBrowse link 3 93,379,872 93,412,058 RGD:6480464
G Cyp2e1 cytochrome P450, family 2, subfamily e, polypeptide 1 JBrowse link 1 213,511,892 213,522,195 RGD:6480464
G Ddit3 DNA-damage inducible transcript 3 JBrowse link 7 70,578,564 70,585,074 RGD:6480464
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 JBrowse link 4 98,648,513 98,709,695 RGD:6480464
G Gsr glutathione-disulfide reductase JBrowse link 16 62,197,617 62,239,987 RGD:6480464
G H2ax H2A.X variant histone JBrowse link 8 48,665,652 48,666,981 RGD:6480464
G Hsp90b1 heat shock protein 90 beta family member 1 JBrowse link 7 27,226,570 27,240,533 RGD:6480464
G Hspa5 heat shock protein family A (Hsp70) member 5 JBrowse link 3 13,838,304 13,842,763 RGD:6480464
G Ltf lactotransferrin JBrowse link 8 119,290,416 119,313,261 RGD:6480464
G Mpo myeloperoxidase JBrowse link 10 75,087,892 75,098,260 RGD:6480464
G Mre11 MRE11 homolog, double strand break repair nuclease JBrowse link 8 13,304,355 13,350,329 RGD:6480464
G Ncf1 neutrophil cytosolic factor 1 JBrowse link 12 25,497,104 25,506,300 RGD:6480464
G Nefh neurofilament heavy JBrowse link 14 85,181,572 85,191,557 RGD:6480464
G Parp1 poly (ADP-ribose) polymerase 1 JBrowse link 13 98,857,255 98,889,444 RGD:6480464
G Rad50 RAD50 double strand break repair protein JBrowse link 10 39,002,130 39,054,042 RGD:6480464
G Rad51 RAD51 recombinase JBrowse link 3 110,918,240 110,942,920 RGD:6480464
G Sult1a1 sulfotransferase family 1A member 1 JBrowse link 1 198,100,586 198,104,106 RGD:6480464
G Sult2a1 sulfotransferase family 2A member 1 JBrowse link 1 76,558,721 76,614,315 RGD:6480464
G Tnfsf10 TNF superfamily member 10 JBrowse link 2 113,008,008 113,026,899 RGD:6480464
G Tp53 tumor protein p53 JBrowse link 10 56,186,299 56,198,449 RGD:6480464
G Xrcc2 X-ray repair cross complementing 2 JBrowse link 4 5,842,013 5,860,516 RGD:6480464
G Xrcc3 X-ray repair cross complementing 3 JBrowse link 6 136,366,917 136,380,751 RGD:6480464
N-methylformamide term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adamts7 ADAM metallopeptidase with thrombospondin type 1 motif, 7 JBrowse link 8 97,535,777 97,575,661 RGD:6480464
G Ampd2 adenosine monophosphate deaminase 2 JBrowse link 2 210,861,624 210,874,348 RGD:6480464
G Angptl4 angiopoietin-like 4 JBrowse link 7 18,627,814 18,634,043 RGD:6480464
G Ankrd10 ankyrin repeat domain 10 JBrowse link 16 83,205,898 83,229,147 RGD:6480464
G Anxa6 annexin A6 JBrowse link 10 40,320,581 40,375,605 RGD:6480464
G Aox1 aldehyde oxidase 1 JBrowse link 9 64,929,682 65,007,872 RGD:6480464
G Arl4a ADP-ribosylation factor like GTPase 4A JBrowse link 6 59,945,926 59,950,586 RGD:6480464
G B3galnt1 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) JBrowse link 2 166,226,736 166,255,978 RGD:6480464
G Birc2 baculoviral IAP repeat-containing 2 JBrowse link 8 6,014,014 6,036,668 RGD:6480464
G Cacybp calcyclin binding protein JBrowse link 13 77,948,771 77,959,089 RGD:6480464
G Cavin2 caveolae associated protein 2 JBrowse link 9 55,244,136 55,256,153 RGD:6480464
G Ccl3 C-C motif chemokine ligand 3 JBrowse link 10 70,869,516 70,871,066 RGD:6480464
G Ccn2 cellular communication network factor 2 JBrowse link 1 21,851,657 21,854,773 RGD:6480464
G Ccnd1 cyclin D1 JBrowse link 1 218,090,750 218,100,447 RGD:6480464
G Ccnd2 cyclin D2 JBrowse link 4 159,674,885 159,697,207 RGD:6480464
G Cdc45 cell division cycle 45 JBrowse link 11 86,328,785 86,354,099 RGD:6480464
G Cish cytokine inducible SH2-containing protein JBrowse link 8 116,054,547 116,059,494 RGD:6480464
G Clstn2 calsyntenin 2 JBrowse link 8 105,322,577 106,036,821 RGD:6480464
G Csnk1d casein kinase 1, delta JBrowse link 10 110,147,786 110,182,413 RGD:6480464
G Cxadr CXADR, Ig-like cell adhesion molecule JBrowse link 11 16,826,269 16,873,564 RGD:6480464
G Cyp2e1 cytochrome P450, family 2, subfamily e, polypeptide 1 JBrowse link 1 213,511,892 213,522,195 RGD:6480464
G Dnaja1 DnaJ heat shock protein family (Hsp40) member A1 JBrowse link 5 57,028,467 57,039,378 RGD:6480464
G Dnmt3a DNA methyltransferase 3 alpha JBrowse link 6 28,205,375 28,346,052 RGD:6480464
G Dusp10 dual specificity phosphatase 10 JBrowse link 13 104,284,660 104,321,455 RGD:6480464
G Dusp6 dual specificity phosphatase 6 JBrowse link 7 41,475,163 41,479,393 RGD:6480464
G Dusp7 dual specificity phosphatase 7 JBrowse link 8 115,069,095 115,076,130 RGD:6480464
G Egfr epidermal growth factor receptor JBrowse link 14 99,919,485 100,104,136 RGD:6480464
G Entpd5 ectonucleoside triphosphate diphosphohydrolase 5 JBrowse link 6 108,087,677 108,123,811 RGD:6480464
G Fgf21 fibroblast growth factor 21 JBrowse link 1 101,595,579 101,596,822 RGD:6480464
G Fn1 fibronectin 1 JBrowse link 9 78,900,111 78,969,018 RGD:6480464
G Fos Fos proto-oncogene, AP-1 transcription factor subunit JBrowse link 6 109,300,433 109,303,299 RGD:6480464
G Gabarapl1 GABA type A receptor associated protein like 1 JBrowse link 4 163,293,724 163,302,866 RGD:6480464
G Gas2 growth arrest-specific 2 JBrowse link 1 107,234,389 107,363,624 RGD:6480464
G Gclc glutamate-cysteine ligase, catalytic subunit JBrowse link 8 85,059,051 85,097,471 RGD:6480464
G Gdf15 growth differentiation factor 15 JBrowse link 16 20,555,395 20,557,978 RGD:6480464
G Gdf9 growth differentiation factor 9 JBrowse link 10 38,782,519 38,793,238 RGD:6480464
G Grpel2 GrpE-like 2, mitochondrial JBrowse link 18 57,037,995 57,050,234 RGD:6480464
G Gsdme gasdermin E JBrowse link 4 79,934,075 79,999,678 RGD:6480464
G Gsta2 glutathione S-transferase alpha 2 JBrowse link 8 85,640,081 85,645,621 RGD:6480464
G Gsta6 glutathione S-transferase alpha 6 JBrowse link 9 27,475,273 27,533,939 RGD:6480464
G Gtf2ird1 GTF2I repeat domain containing 1 JBrowse link 12 25,264,052 25,370,947 RGD:6480464
G Gtpbp2 GTP binding protein 2 JBrowse link 9 17,198,957 17,208,456 RGD:6480464
G Habp2 hyaluronan binding protein 2 JBrowse link 1 277,068,715 277,104,567 RGD:6480464
G Hbp1 HMG-box transcription factor 1 JBrowse link 6 51,231,479 51,257,699 RGD:6480464
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase JBrowse link 2 27,480,224 27,500,654 RGD:6480464
G Hmox1 heme oxygenase 1 JBrowse link 19 14,508,634 14,515,455 RGD:6480464
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 JBrowse link 4 81,237,496 81,241,281 RGD:6480464
G Hspa1b heat shock protein family A (Hsp70) member 1B JBrowse link 20 4,877,638 4,880,112 RGD:6480464
G Hspa8 heat shock protein family A (Hsp70) member 8 JBrowse link 8 44,989,401 44,993,261 RGD:6480464
G Hspb1 heat shock protein family B (small) member 1 JBrowse link 12 23,839,390 23,841,051 RGD:6480464
G Hspb8 heat shock protein family B (small) member 8 JBrowse link 12 45,905,371 45,920,014 RGD:6480464
G Hspd1 heat shock protein family D (Hsp60) member 1 JBrowse link 9 61,680,529 61,691,202 RGD:6480464
G Hsph1 heat shock protein family H (Hsp110) member 1 JBrowse link 12 6,322,685 6,341,898 RGD:6480464
G Ikbkg inhibitor of nuclear factor kappa B kinase regulatory subunit gamma JBrowse link X 156,254,187 156,280,046 RGD:6480464
G Il15ra interleukin 15 receptor subunit alpha JBrowse link 17 70,451,861 70,481,838 RGD:6480464
G Il1rap interleukin 1 receptor accessory protein JBrowse link 11 77,456,648 77,593,208 RGD:6480464
G Inpp1 inositol polyphosphate-1-phosphatase JBrowse link 9 53,544,602 53,574,303 RGD:6480464
G Kcnk5 potassium two pore domain channel subfamily K member 5 JBrowse link 15 4,554,603 4,597,000 RGD:6480464
G Kdm2b lysine demethylase 2B JBrowse link 12 39,021,924 39,161,954 RGD:6480464
G Klf6 Kruppel-like factor 6 JBrowse link 17 67,887,939 67,945,052 RGD:6480464
G Lgals7 galectin 7 JBrowse link 1 87,044,823 87,047,223 RGD:6480464
G Lipg lipase G, endothelial type JBrowse link 18 70,903,528 70,924,434 RGD:6480464
G LOC100909544 bromodomain-containing protein 2-like JBrowse link 20 3,910,555 3,918,348 RGD:6480464
G Lpin2 lipin 2 JBrowse link 9 119,517,101 119,591,533 RGD:6480464
G Ly96 lymphocyte antigen 96 JBrowse link 5 1,972,212 1,989,448 RGD:6480464
G Mafk MAF bZIP transcription factor K JBrowse link 12 16,923,989 16,934,706 RGD:6480464
G Nde1 nudE neurodevelopment protein 1 JBrowse link 10 860,513 904,624 RGD:6480464
G Noct nocturnin JBrowse link 2 140,286,661 140,306,869 RGD:6480464
G Nr1d2 nuclear receptor subfamily 1, group D, member 2 JBrowse link 15 8,730,871 8,757,165 RGD:6480464
G Pgd phosphogluconate dehydrogenase JBrowse link 5 165,966,128 165,982,327 RGD:6480464
G Plk3 polo-like kinase 3 JBrowse link 5 135,997,725 136,002,900 RGD:6480464
G Pnrc1 proline-rich nuclear receptor coactivator 1 JBrowse link 5 48,501,472 48,504,511 RGD:6480464
G Ppp1r10 protein phosphatase 1, regulatory subunit 10 JBrowse link 20 3,329,677 3,344,286 RGD:6480464
G Rbpms RNA binding protein, mRNA processing factor JBrowse link 16 61,954,569 62,109,998 RGD:6480464
G Rcan1 regulator of calcineurin 1 JBrowse link 11 32,539,689 32,620,274 RGD:6480464
G RT1-DMb RT1 class II, locus DMb JBrowse link 20 3,945,383 3,952,838 RGD:6480464
G Rtp3 receptor (chemosensory) transporter protein 3 JBrowse link 8 119,260,609 119,265,501 RGD:6480464
G Sgk1 serum/glucocorticoid regulated kinase 1 JBrowse link 1 24,185,451 24,302,309 RGD:6480464
G Sgk2 serum/glucocorticoid regulated kinase 2 JBrowse link 3 159,361,313 159,385,843 RGD:6480464
G Sirt1 sirtuin 1 JBrowse link 20 26,831,971 26,851,587 RGD:6480464
G Slc14a1 solute carrier family 14 member 1 (Kidd blood group) JBrowse link 18 74,461,064 74,504,475 RGD:6480464
G Slc25a19 solute carrier family 25 member 19 JBrowse link 10 104,166,594 104,179,523 RGD:6480464
G Slc38a2 solute carrier family 38, member 2 JBrowse link 7 138,088,654 138,100,869 RGD:6480464
G Slc39a8 solute carrier family 39 member 8 JBrowse link 2 241,028,851 241,092,584 RGD:6480464
G Sqstm1 sequestosome 1 JBrowse link 10 35,704,728 35,716,316 RGD:6480464
G Srebf1 sterol regulatory element binding transcription factor 1 JBrowse link 10 46,570,996 46,593,021 RGD:6480464
G Srpk2 SRSF protein kinase 2 JBrowse link 4 7,994,025 8,187,455 RGD:6480464
G Srxn1 sulfiredoxin 1 JBrowse link 3 147,608,850 147,614,410 RGD:6480464
G Thrsp thyroid hormone responsive JBrowse link 1 162,381,251 162,385,575 RGD:6480464
G Tnfaip6 TNF alpha induced protein 6 JBrowse link 3 37,545,238 37,564,704 RGD:6480464
G Tob1 transducer of ErbB-2.1 JBrowse link 10 81,913,689 81,915,727 RGD:6480464
G Topors TOP1 binding arginine/serine rich protein JBrowse link 5 56,554,956 56,566,503 RGD:6480464
G Trib3 tribbles pseudokinase 3 JBrowse link 3 147,814,056 147,819,650 RGD:6480464
G Txnrd1 thioredoxin reductase 1 JBrowse link 7 26,946,124 26,984,400 RGD:6480464
G Ubap1 ubiquitin-associated protein 1 JBrowse link 5 57,738,309 57,778,724 RGD:6480464
G Ugdh UDP-glucose 6-dehydrogenase JBrowse link 14 44,479,614 44,502,845 RGD:6480464
G Ugp2 UDP-glucose pyrophosphorylase 2 JBrowse link 14 106,208,174 106,249,322 RGD:6480464
G Usp9x ubiquitin specific peptidase 9, X-linked JBrowse link X 10,510,033 10,660,555 RGD:6480464
G Vegfd vascular endothelial growth factor D JBrowse link X 31,816,480 31,852,239 RGD:6480464
G Zfp467 zinc finger protein 467 JBrowse link 4 78,068,822 78,077,962 RGD:6480464
G Zfx zinc finger protein X-linked JBrowse link X 63,158,368 63,204,971 RGD:6480464
G Zwint ZW10 interacting kinetochore protein JBrowse link 20 17,075,781 17,091,715 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19654
    role 19598
      application 19220
        solvent 16064
          formamide 128
            5-formamidopyrimidine 0
            N,N-dimethylformamide + 27
            N-benzylformamide + 0
            N-butylformamide 0
            N-cyclohexylformamide 0
            N-furfurylformamide 0
            N-methylformamide 102
            carbamoyl 0
            formanilide 0
            morpholine-4-carbaldehyde 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19654
    subatomic particle 19650
      composite particle 19650
        hadron 19650
          baryon 19650
            nucleon 19650
              atomic nucleus 19650
                atom 19650
                  main group element atom 19531
                    p-block element atom 19531
                      carbon group element atom 19413
                        carbon atom 19405
                          organic molecular entity 19405
                            organic group 18331
                              organic divalent group 18321
                                organodiyl group 18321
                                  carbonyl group 18209
                                    carbonyl compound 18209
                                      carboxylic acid 17908
                                        carboacyl group 16930
                                          univalent carboacyl group 16930
                                            carbamoyl group 16610
                                              carboxamide 16610
                                                formamides 1338
                                                  formamide 128
                                                    5-formamidopyrimidine 0
                                                    N,N-dimethylformamide + 27
                                                    N-benzylformamide + 0
                                                    N-butylformamide 0
                                                    N-cyclohexylformamide 0
                                                    N-furfurylformamide 0
                                                    N-methylformamide 102
                                                    carbamoyl 0
                                                    formanilide 0
                                                    morpholine-4-carbaldehyde 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.