Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   


Term:isopentenyl diphosphate
go back to main search page
Accession:CHEBI:16584 term browser browse the term
Definition:A prenol phosphate comprising 3-methylbut-3-en-1-ol having an O-diphosphate substituent.
Synonyms:related_synonym: 3-Methyl-3-butenyl pyrophosphate;   3-methylbut-3-en-1-yl trihydrogen diphosphate;   3-methylbut-3-enyl phosphono hydrogen phosphate;   Diphosphoric acid mono(3-methyl-3-butenyl) ester;   Formula=C5H12O7P2;   IPP;   IPPP;   InChI=1S/C5H12O7P2/c1-5(2)3-4-11-14(9,10)12-13(6,7)8/h1,3-4H2,2H3,(H,9,10)(H2,6,7,8);   InChIKey=NUHSROFQTUXZQQ-UHFFFAOYSA-N;   Isopentenyl pyrophosphate;   Mono(3-methyl-3-butenyl) diphosphate;   SMILES=CC(=C)CCOP(O)(=O)OP(O)(O)=O;   delta-3-Isopentenyl pyrophosphate;   delta3-Methyl-3-butenyl diphosphate;   delta3-isopentenyl diphosphate
 alt_id: CHEBI:14473;   CHEBI:24907;   CHEBI:6037
 xref: Beilstein:1713792 "Beilstein";   CAS:358-71-4 "ChemIDplus";   CAS:358-71-4 "KEGG COMPOUND";   DrugBank:DB04714;   KEGG:C00129;   KNApSAcK:C00000848;   LIPID_MAPS_instance:LMPR01010008 "LIPID MAPS"
 xref_mesh: MESH:C004809
 xref: PDBeChem:IPE;   PMID:11278429 "Europe PMC";   PMID:15450402 "Europe PMC";   PMID:23000003 "Europe PMC";   PMID:23543734 "Europe PMC";   PMID:23747531 "Europe PMC";   PMID:23872678 "Europe PMC";   PMID:7584140 "Europe PMC";   PMID:7753173 "Europe PMC";   Reaxys:1713792 "Reaxys";   Wikipedia:Isopentenyl_pyrophosphate
 cyclic_relationship: is_conjugate_acid_of CHEBI:128769

show annotations for term's descendants       view all columns           Sort by:
isopentenyl diphosphate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccr5 C-C motif chemokine receptor 5 JBrowse link 8 133,192,398 133,215,599 RGD:6480464
G Fdps farnesyl diphosphate synthase JBrowse link 2 188,403,595 188,413,219 RGD:6480464
G Fgf9 fibroblast growth factor 9 JBrowse link 15 38,341,657 38,386,945 RGD:6480464
G Ifng interferon gamma JBrowse link 7 61,337,383 61,341,419 RGD:6480464
G Il2ra interleukin 2 receptor subunit alpha JBrowse link 17 70,500,672 70,547,929 RGD:6480464
G Mvk mevalonate kinase JBrowse link 12 47,904,266 47,920,457 RGD:6480464
G Trpa1 transient receptor potential cation channel, subfamily A, member 1 JBrowse link 5 3,783,247 3,836,485 RGD:6480464
G Trpv3 transient receptor potential cation channel, subfamily V, member 3 JBrowse link 10 59,829,755 59,863,780 RGD:6480464
G Vdr vitamin D receptor JBrowse link 7 139,344,452 139,394,138 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19662
    role 19606
      chemical role 19126
        antioxidant 14072
          isopentenyl diphosphate 9
Path 2
Term Annotations click to browse term
  CHEBI ontology 19662
    subatomic particle 19658
      composite particle 19658
        hadron 19658
          baryon 19658
            nucleon 19658
              atomic nucleus 19658
                atom 19658
                  main group element atom 19539
                    p-block element atom 19539
                      chalcogen 19228
                        oxygen atom 19182
                          oxygen molecular entity 19182
                            hydroxides 18964
                              oxoacid 18075
                                pnictogen oxoacid 8543
                                  phosphorus oxoacid 8436
                                    phosphoric acids 7318
                                      phosphoric acid 7318
                                        phosphoric acid derivative 6968
                                          phosphate 6968
                                            organic phosphate 6967
                                              phospholipid 286
                                                isoprenoid phosphate 72
                                                  prenol phosphate 72
                                                    isopentenyl diphosphate 9
paths to the root


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.