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ONTOLOGY REPORT - ANNOTATIONS


Term:scopolamine
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Accession:CHEBI:16794 term browser browse the term
Definition:A tropane alkaloid that is the (S)-tropic acid ester of 6beta,7beta-epoxy-1alphaH,5alphaH-tropan-3alpha-ol.
Synonyms:exact_synonym: (1R,2R,4S,5S,7S)-9-methyl-3-oxa-9-azatricyclo[3.3.1.0(2,4)]non-7-yl (2S)-3-hydroxy-2-phenylpropanoate
 related_synonym: (1S,3S,5R,6R,7S)-6,7-epoxytropan-3-yl (2S)-3-hydroxy-2-phenylpropanoate;   6,7-Epoxytropine tropate;   6-beta,7-beta-Epoxy-3-alpha-tropanyl S-(-)-tropate;   Formula=C17H21NO4;   Hyoscine;   InChI=1S/C17H21NO4/c1-18-13-7-11(8-14(18)16-15(13)22-16)21-17(20)12(9-19)10-5-3-2-4-6-10/h2-6,11-16,19H,7-9H2,1H3/t11-,12-,13-,14+,15-,16+/m1/s1;   InChIKey=STECJAGHUSJQJN-FWXGHANASA-N;   SMILES=CN1[C@H]2C[C@@H](C[C@@H]1[C@H]1O[C@@H]21)OC(=O)[C@H](CO)c1ccccc1;   Scopine tropate;   Transderm-Scop;   alpha-(Hydroxymethyl)benzeneacetic acid 9-methyl-3-oxa-9-azatricyclo(3.3.1.0(2.4))non-7-yl ester
 alt_id: CHEBI:15066;   CHEBI:26610;   CHEBI:9056
 xref: CAS:51-34-3 "ChemIDplus";   CAS:51-34-3 "KEGG COMPOUND";   CAS:51-34-3 "NIST Chemistry WebBook";   DrugBank:DB00747;   HMDB:HMDB0003573;   KEGG:C01851;   KEGG:D00138;   KNApSAcK:C00002292
 xref_mesh: MESH:D012601
 xref: MetaCyc:SCOPOLAMINE;   PMID:11718188 "Europe PMC";   PMID:23334071 "Europe PMC";   Reaxys:91904 "Reaxys";   Wikipedia:Scopolamine
 cyclic_relationship: is_conjugate_base_of CHEBI:61269


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scopolamine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ABCB1 ATP binding cassette subfamily B member 1 JBrowse link 7 87,503,017 87,713,323 RGD:6480464
G ABCG1 ATP binding cassette subfamily G member 1 JBrowse link 21 42,199,689 42,304,387 RGD:6480464
G ACHE acetylcholinesterase (Cartwright blood group) JBrowse link 7 100,889,994 100,896,994 RGD:6480464
G ADORA3 adenosine A3 receptor JBrowse link 1 111,499,429 111,503,633 RGD:6480464
G AGT angiotensinogen JBrowse link 1 230,702,523 230,714,122 RGD:6480464
G APBA1 amyloid beta precursor protein binding family A member 1 JBrowse link 9 69,427,532 69,673,012 RGD:6480464
G APLP2 amyloid beta precursor like protein 2 JBrowse link 11 130,069,894 130,144,811 RGD:6480464
G APP amyloid beta precursor protein JBrowse link 21 25,880,550 26,171,128 RGD:6480464
G ARC activity regulated cytoskeleton associated protein JBrowse link 8 142,611,049 142,614,479 RGD:6480464
G ARG2 arginase 2 JBrowse link 14 67,619,920 67,651,708 RGD:6480464
G ARL4D ADP ribosylation factor like GTPase 4D JBrowse link 17 43,398,993 43,401,137 RGD:6480464
G AVP arginine vasopressin JBrowse link 20 3,082,556 3,093,521 RGD:6480464
G AVPR1A arginine vasopressin receptor 1A JBrowse link 12 63,142,759 63,151,201 RGD:6480464
G BAX BCL2 associated X, apoptosis regulator JBrowse link 19 48,954,825 48,961,798 RGD:6480464
G BCAT1 branched chain amino acid transaminase 1 JBrowse link 12 24,810,024 24,949,101 RGD:6480464
G BCL2 BCL2 apoptosis regulator JBrowse link 18 63,123,346 63,320,280 RGD:6480464
G BDNF brain derived neurotrophic factor JBrowse link 11 27,654,893 27,722,030 RGD:6480464
G CACNA1D calcium voltage-gated channel subunit alpha1 D JBrowse link 3 53,494,611 53,813,733 RGD:6480464
G CAMKK2 calcium/calmodulin dependent protein kinase kinase 2 JBrowse link 12 121,237,692 121,298,308 RGD:6480464
G CARTPT CART prepropeptide JBrowse link 5 71,719,275 71,721,045 RGD:6480464
G CASP3 caspase 3 JBrowse link 4 184,627,696 184,649,475 RGD:6480464
G CAT catalase JBrowse link 11 34,438,934 34,472,060 RGD:6480464
G CD3E CD3e molecule JBrowse link 11 118,304,730 118,316,173 RGD:6480464
G CDKL4 cyclin dependent kinase like 4 JBrowse link 2 39,168,045 39,248,835 RGD:6480464
G CHAT choline O-acetyltransferase JBrowse link 10 49,609,095 49,665,104 RGD:6480464
G CHRM1 cholinergic receptor muscarinic 1 JBrowse link 11 62,908,675 62,921,861 RGD:6480464
G CHRM4 cholinergic receptor muscarinic 4 JBrowse link 11 46,383,789 46,391,776 RGD:6480464
G CHRM5 cholinergic receptor muscarinic 5 JBrowse link 15 33,968,497 34,067,458 RGD:6480464
G CHRNA4 cholinergic receptor nicotinic alpha 4 subunit JBrowse link 20 63,343,223 63,375,471 RGD:6480464
G CHRNB2 cholinergic receptor nicotinic beta 2 subunit JBrowse link 1 154,567,778 154,584,708 RGD:6480464
G COCH cochlin JBrowse link 14 30,874,496 30,890,618 RGD:6480464
G CORO1B coronin 1B JBrowse link 11 67,435,510 67,443,821 RGD:6480464
G COX5B cytochrome c oxidase subunit 5B JBrowse link 2 97,646,062 97,648,383 RGD:6480464
G CREB1 cAMP responsive element binding protein 1 JBrowse link 2 207,529,943 207,605,988 RGD:6480464
G CRYAB crystallin alpha B JBrowse link 11 111,908,564 111,923,740 RGD:6480464
G CSF2 colony stimulating factor 2 JBrowse link 5 132,073,789 132,076,170 RGD:6480464
G CXCR5 C-X-C motif chemokine receptor 5 JBrowse link 11 118,883,892 118,897,787 RGD:6480464
G DDC dopa decarboxylase JBrowse link 7 50,458,436 50,565,460 RGD:6480464
G DGUOK deoxyguanosine kinase JBrowse link 2 73,926,827 73,958,961 RGD:6480464
G DIO2 iodothyronine deiodinase 2 JBrowse link 14 80,197,526 80,231,057 RGD:6480464
G DUSP5 dual specificity phosphatase 5 JBrowse link 10 110,497,907 110,511,533 RGD:6480464
G DUSP6 dual specificity phosphatase 6 JBrowse link 12 89,347,235 89,352,501 RGD:6480464
G EGFR epidermal growth factor receptor JBrowse link 7 55,019,017 55,211,628 RGD:6480464
G EGR1 early growth response 1 JBrowse link 5 138,465,479 138,469,303 RGD:6480464
G EGR2 early growth response 2 JBrowse link 10 62,811,996 62,819,167 RGD:6480464
G EIF2S1 eukaryotic translation initiation factor 2 subunit alpha JBrowse link 14 67,360,328 67,386,516 RGD:6480464
G EML1 EMAP like 1 JBrowse link 14 99,737,699 99,942,060 RGD:6480464
G FOS Fos proto-oncogene, AP-1 transcription factor subunit JBrowse link 14 75,278,828 75,282,230 RGD:6480464
G GABBR1 gamma-aminobutyric acid type B receptor subunit 1 JBrowse link 6 29,602,228 29,633,183 RGD:6480464
G GAP43 growth associated protein 43 JBrowse link 3 115,623,510 115,721,485 RGD:6480464
G GFAP glial fibrillary acidic protein JBrowse link 17 44,903,159 44,915,552 RGD:6480464
G GJB2 gap junction protein beta 2 JBrowse link 13 20,187,470 20,192,938 RGD:6480464
G GPC3 glypican 3 JBrowse link X 133,535,745 133,985,616 RGD:6480464
G GRM4 glutamate metabotropic receptor 4 JBrowse link 6 34,018,643 34,155,622 RGD:6480464
G GSR glutathione-disulfide reductase JBrowse link 8 30,678,061 30,727,999 RGD:6480464
G GYPC glycophorin C (Gerbich blood group) JBrowse link 2 126,655,935 126,696,675 RGD:6480464
G HOMER1 homer scaffold protein 1 JBrowse link 5 79,372,636 79,514,134 RGD:6480464
G HRH1 histamine receptor H1 JBrowse link 3 11,137,238 11,263,557 RGD:6480464
G HRH2 histamine receptor H2 JBrowse link 5 175,657,762 175,710,756 RGD:6480464
G HRH3 histamine receptor H3 JBrowse link 20 62,213,845 62,220,278 RGD:6480464
G HSPA2 heat shock protein family A (Hsp70) member 2 JBrowse link 14 64,540,468 64,543,237 RGD:6480464
G HTR1A 5-hydroxytryptamine receptor 1A JBrowse link 5 63,960,048 63,962,292 RGD:6480464
G HTR2C 5-hydroxytryptamine receptor 2C JBrowse link X 114,584,078 114,910,061 RGD:6480464
G HTR6 5-hydroxytryptamine receptor 6 JBrowse link 1 19,664,875 19,680,966 RGD:6480464
G IFNG interferon gamma JBrowse link 12 68,154,768 68,159,740 RGD:6480464
G IL1A interleukin 1 alpha JBrowse link 2 112,773,925 112,784,493 RGD:6480464
G IL1B interleukin 1 beta JBrowse link 2 112,829,751 112,836,843 RGD:6480464
G IL1RN interleukin 1 receptor antagonist JBrowse link 2 113,099,365 113,134,016 RGD:6480464
G IL6 interleukin 6 JBrowse link 7 22,725,889 22,732,002 RGD:6480464
G ITPR1 inositol 1,4,5-trisphosphate receptor type 1 JBrowse link 3 4,493,348 4,847,840 RGD:6480464
G JUN Jun proto-oncogene, AP-1 transcription factor subunit JBrowse link 1 58,780,791 58,784,047 RGD:6480464
G JUNB JunB proto-oncogene, AP-1 transcription factor subunit JBrowse link 19 12,791,486 12,793,315 RGD:6480464
G KCNA4 potassium voltage-gated channel subfamily A member 4 JBrowse link 11 30,009,730 30,017,030 RGD:6480464
G KCNB1 potassium voltage-gated channel subfamily B member 1 JBrowse link 20 49,363,877 49,484,033 RGD:6480464
G KCND2 potassium voltage-gated channel subfamily D member 2 JBrowse link 7 120,273,175 120,750,337 RGD:6480464
G KCNJ3 potassium inwardly rectifying channel subfamily J member 3 JBrowse link 2 154,698,581 154,858,354 RGD:6480464
G KLF2 Kruppel like factor 2 JBrowse link 19 16,324,826 16,328,685 RGD:6480464
G KLF4 Kruppel like factor 4 JBrowse link 9 107,484,852 107,489,769 RGD:6480464
G LNPEP leucyl and cystinyl aminopeptidase JBrowse link 5 96,934,859 97,037,513 RGD:6480464
G MADD MAP kinase activating death domain JBrowse link 11 47,269,375 47,330,031 RGD:6480464
G MAP2 microtubule associated protein 2 JBrowse link 2 209,424,047 209,734,118 RGD:6480464
G MAPT microtubule associated protein tau JBrowse link 17 45,894,382 46,028,334 RGD:6480464
G MBP myelin basic protein JBrowse link 18 76,978,833 77,133,708 RGD:6480464
G MUC5AC mucin 5AC, oligomeric mucus/gel-forming JBrowse link 11 1,157,953 1,201,138 RGD:6480464
G NEFH neurofilament heavy JBrowse link 22 29,480,218 29,491,390 RGD:6480464
G NGF nerve growth factor JBrowse link 1 115,285,915 115,338,253 RGD:6480464
G NOS2 nitric oxide synthase 2 JBrowse link 17 27,756,766 27,800,529 RGD:6480464
G NOVA1 NOVA alternative splicing regulator 1 JBrowse link 14 26,443,090 26,598,033 RGD:6480464
G NOVA2 NOVA alternative splicing regulator 2 JBrowse link 19 45,933,734 45,973,865 RGD:6480464
G NQO1 NAD(P)H quinone dehydrogenase 1 JBrowse link 16 69,709,401 69,726,560 RGD:6480464
G NQO2 N-ribosyldihydronicotinamide:quinone reductase 2 JBrowse link 6 2,999,816 3,019,876 RGD:6480464
G NR1D1 nuclear receptor subfamily 1 group D member 1 JBrowse link 17 40,092,793 40,100,589 RGD:6480464
G NR4A1 nuclear receptor subfamily 4 group A member 1 JBrowse link 12 52,022,832 52,059,507 RGD:6480464
G NTF3 neurotrophin 3 JBrowse link 12 5,432,108 5,495,299 RGD:6480464
G NTRK2 neurotrophic receptor tyrosine kinase 2 JBrowse link 9 84,668,458 85,027,070 RGD:6480464
G NTRK3 neurotrophic receptor tyrosine kinase 3 JBrowse link 15 87,859,749 88,256,796 RGD:6480464
G PDCD4 programmed cell death 4 JBrowse link 10 110,871,795 110,900,006 RGD:6480464
G PDYN prodynorphin JBrowse link 20 1,978,756 1,994,285 RGD:6480464
G PENK proenkephalin JBrowse link 8 56,440,957 56,446,641 RGD:6480464
G PGAM1 phosphoglycerate mutase 1 JBrowse link 10 97,426,191 97,433,444 RGD:6480464
G PREP prolyl endopeptidase JBrowse link 6 105,273,218 105,403,102 RGD:6480464
G PRKRA protein activator of interferon induced protein kinase EIF2AK2 JBrowse link 2 178,431,414 178,451,175 RGD:6480464
G PSEN2 presenilin 2 JBrowse link 1 226,870,572 226,903,829 RGD:6480464
G PTGS2 prostaglandin-endoperoxide synthase 2 JBrowse link 1 186,671,791 186,680,423 RGD:6480464
G RAB14 RAB14, member RAS oncogene family JBrowse link 9 121,178,133 121,201,869 RGD:6480464
G RAPGEF3 Rap guanine nucleotide exchange factor 3 JBrowse link 12 47,734,363 47,758,880 RGD:6480464
G RELA RELA proto-oncogene, NF-kB subunit JBrowse link 11 65,653,596 65,662,972 RGD:6480464
G REM2 RRAD and GEM like GTPase 2 JBrowse link 14 22,883,165 22,887,678 RGD:6480464
G RGS7BP regulator of G protein signaling 7 binding protein JBrowse link 5 64,505,947 64,612,330 RGD:6480464
G ROBO3 roundabout guidance receptor 3 JBrowse link 11 124,865,432 124,881,471 RGD:6480464
G RRAGA Ras related GTP binding A JBrowse link 9 19,049,427 19,051,025 RGD:6480464
G S100A4 S100 calcium binding protein A4 JBrowse link 1 153,543,621 153,545,806 RGD:6480464
G S1PR1 sphingosine-1-phosphate receptor 1 JBrowse link 1 101,236,749 101,241,520 RGD:6480464
G SCAMP2 secretory carrier membrane protein 2 JBrowse link 15 74,843,730 74,873,365 RGD:6480464
G SIGMAR1 sigma non-opioid intracellular receptor 1 JBrowse link 9 34,634,722 34,637,826 RGD:6480464
G SLC47A1 solute carrier family 47 member 1 JBrowse link 17 19,533,854 19,579,034 RGD:6480464
G SLC47A2 solute carrier family 47 member 2 JBrowse link 17 19,678,292 19,719,598 RGD:6480464
G SULT1A1 sulfotransferase family 1A member 1 JBrowse link 16 28,605,587 28,623,586 RGD:6480464
G SYP synaptophysin JBrowse link X 49,187,812 49,200,202 RGD:6480464
G TAC1 tachykinin precursor 1 JBrowse link 7 97,732,086 97,740,472 RGD:6480464
G TNF tumor necrosis factor JBrowse link 6 31,575,565 31,578,336 RGD:6480464
G TNRC6A trinucleotide repeat containing adaptor 6A JBrowse link 16 24,610,205 24,826,223 RGD:6480464
G TPD52L1 TPD52 like 1 JBrowse link 6 125,153,730 125,264,407 RGD:6480464
G VGF VGF nerve growth factor inducible JBrowse link 7 101,162,509 101,169,956 RGD:6480464
G VIP vasoactive intestinal peptide JBrowse link 6 152,750,797 152,759,765 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 23673
    role 23561
      biological role 23522
        biochemical role 22879
          metabolite 22767
            scopolamine 125
              scopolamine methobromide 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 23673
    subatomic particle 23620
      composite particle 23620
        hadron 23620
          baryon 23620
            nucleon 23620
              atomic nucleus 23620
                atom 23620
                  main group element atom 23437
                    p-block element atom 23437
                      carbon group element atom 23135
                        carbon atom 23111
                          organic molecular entity 23111
                            organic group 21810
                              organic divalent group 21779
                                organodiyl group 21779
                                  carbonyl group 21752
                                    carbonyl compound 21752
                                      carboxylic acid 20773
                                        monocarboxylic acid 19753
                                          fatty acid 18118
                                            saturated fatty acid 18091
                                              propionic acid 4303
                                                2-arylpropionic acid 194
                                                  hydratropic acid 194
                                                    tropic acid 189
                                                      (S)-tropic acid 189
                                                        scopolamine 125
                                                          scopolamine methobromide 0
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.