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ONTOLOGY REPORT - ANNOTATIONS


Term:1H-indole
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Accession:CHEBI:16881 term browser browse the term
Definition:An indole that has formula C8H7N.
Synonyms:related_synonym: 2,3-Benzopyrrole;   Formula=C8H7N;   INDOLE;   InChI=1S/C8H7N/c1-2-4-8-7(3-1)5-6-9-8/h1-6,9H;   InChIKey=SIKJAQJRHWYJAI-UHFFFAOYSA-N;   Indol;   SMILES=c1cc2ccccc2[nH]1
 alt_id: CHEBI:14444;   CHEBI:24794;   CHEBI:43537;   CHEBI:5900
 xref: Beilstein:107693 "Beilstein";   CAS:120-72-9 "ChemIDplus";   CAS:120-72-9 "KEGG COMPOUND";   CAS:120-72-9 "NIST Chemistry WebBook";   DrugBank:DB04532;   Gmelin:3477 "Gmelin";   KEGG:C00463;   KNApSAcK:C00001418
 xref_mesh: MESH:C030374
 xref: PDBeChem:IND
 cyclic_relationship: is_tautomer_of CHEBI:35579


show annotations for term's descendants       view all columns           Sort by:
 
1H-indole term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ahr aryl hydrocarbon receptor JBrowse link 6 54,963,990 55,001,806 RGD:6480464
G Arnt aryl hydrocarbon receptor nuclear translocator JBrowse link 2 196,594,178 196,651,486 RGD:6480464
G Epo erythropoietin JBrowse link 12 22,274,828 22,278,268 RGD:6480464
G Mc1r melanocortin 1 receptor JBrowse link 19 56,215,420 56,219,987 RGD:6480464
G Mc3r melanocortin 3 receptor JBrowse link 3 170,252,901 170,253,998 RGD:6480464
G Mc4r melanocortin 4 receptor JBrowse link 18 62,612,838 62,614,725 RGD:6480464
G Mc5r melanocortin 5 receptor JBrowse link 18 64,113,659 64,118,700 RGD:6480464
2-methyl-1H-indole term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 JBrowse link 8 62,472,087 62,478,122 RGD:6480464
G Cyp1a2 cytochrome P450, family 1, subfamily a, polypeptide 2 JBrowse link 8 62,451,360 62,458,244 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19716
    chemical entity 19714
      molecular entity 19711
        mancude ring 7852
          organic mancude parent 7852
            mancude organic heterocyclic parent 7852
              mancude organic heterobicyclic parent 5176
                indole 9
                  1H-indole 9
                    (R)-3-(5-benzyloxyindol-3-yl)lactic acid 0
                    (R)-indole-3-lactic acid 0
                    2-methyl-1H-indole 2
                    N-(beta-D-glucopyranosyl)indole 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19716
    subatomic particle 19712
      composite particle 19712
        hadron 19712
          baryon 19712
            nucleon 19712
              atomic nucleus 19712
                atom 19712
                  main group element atom 19598
                    p-block element atom 19598
                      carbon group element atom 19486
                        carbon atom 19480
                          organic molecular entity 19480
                            organic molecule 19402
                              organic cyclic compound 19158
                                organic heterocyclic compound 18245
                                  organic heteropolycyclic compound 17500
                                    organic heterobicyclic compound 15910
                                      benzopyrrole 5757
                                        indoles 5532
                                          indole 9
                                            1H-indole 9
                                              (R)-3-(5-benzyloxyindol-3-yl)lactic acid 0
                                              (R)-indole-3-lactic acid 0
                                              2-methyl-1H-indole 2
                                              N-(beta-D-glucopyranosyl)indole 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.