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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:D-xylulose
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Accession:CHEBI:17140 term browser browse the term
Definition:The D-enantiomer of xylulose.
Synonyms:exact_synonym: D-threo-pent-2-ulose
 related_synonym: D-Lyxulose;   D-Xul;   D-threo-Pentulose;   Formula=C5H10O5;   InChI=1S/C5H10O5/c6-1-3(8)5(10)4(9)2-7/h3,5-8,10H,1-2H2/t3-,5+/m1/s1;   InChIKey=ZAQJHHRNXZUBTE-WUJLRWPWSA-N;   SMILES=C(O)C(=O)[C@@H](O)[C@H](O)CO
 alt_id: CHEBI:13035;   CHEBI:21120;   CHEBI:4268;   CHEBI:46514
 xref: CAS:551-84-8;   DrugBank:DB03947;   HMDB:HMDB0001644;   KEGG:C00310;   KNApSAcK:C00019684;   MetaCyc:D-XYLULOSE;   PDBeChem:XUL;   PMID:15234337;   Reaxys:1723052
 cyclic_relationship: is_enantiomer_of CHEBI:17399


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D-xylulose 5-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Taldo1 transaldolase 1 increases abundance ISO TALDO1 gene mutant form results in increased abundance of xylulose-5-phosphate CTD PMID:19436114 NCBI chr 1:214,375,555...214,385,886
Ensembl chr 1:214,375,515...214,385,885
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Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19785
    role 19732
      biological role 19732
        biochemical role 19281
          metabolite 19262
            prokaryotic metabolite 18356
              bacterial metabolite 18356
                Escherichia coli metabolite 18260
                  D-xylulose 1
                    1-deoxy-D-xylulose 0
                    1-deoxy-D-xylulose 5-phosphate 0
                    D-xylulose 1,5-bisphosphate 0
                    D-xylulose 5-phosphate 1
Path 2
Term Annotations click to browse term
  CHEBI ontology 19785
    subatomic particle 19782
      composite particle 19782
        hadron 19782
          baryon 19782
            nucleon 19782
              atomic nucleus 19782
                atom 19782
                  main group element atom 19670
                    p-block element atom 19670
                      carbon group element atom 19572
                        carbon atom 19561
                          organic molecular entity 19561
                            heteroorganic entity 19147
                              organochalcogen compound 18855
                                organooxygen compound 18777
                                  carbohydrates and carbohydrate derivatives 12178
                                    carbohydrate 12178
                                      monosaccharide 4022
                                        ketose 367
                                          ketopentose 2
                                            xylulose 2
                                              D-xylulose 1
                                                1-deoxy-D-xylulose 0
                                                1-deoxy-D-xylulose 5-phosphate 0
                                                D-xylulose 1,5-bisphosphate 0
                                                D-xylulose 5-phosphate 1
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