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ONTOLOGY REPORT - ANNOTATIONS


Term:putrescine
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Accession:CHEBI:17148 term browser browse the term
Definition:A four-carbon alkane-alpha,omega-diamine. It is obtained by the breakdown of amino acids and is responsible for the foul odour of putrefying flesh.
Synonyms:related_synonym: 1,4-Butanediamine;   1,4-DIAMINOBUTANE;   1,4-butylenediamine;   1,4-tetramethylenediamine;   Butane-1,4-diamine;   Formula=C4H12N2;   H2N(CH2)4NH2;   InChI=1S/C4H12N2/c5-3-1-2-4-6/h1-6H2;   InChIKey=KIDHWZJUCRJVML-UHFFFAOYSA-N;   Putrescin;   Putreszin;   SMILES=NCCCCN;   Tetramethylendiamin;   Tetramethylenediamine;   butylenediamine;   putrescina
 alt_id: CHEBI:14972;   CHEBI:26405;   CHEBI:45092;   CHEBI:8650
 xref: BPDB:1393;   Beilstein:605282 "Beilstein";   CAS:110-60-1 "ChemIDplus";   CAS:110-60-1 "KEGG COMPOUND";   CAS:110-60-1 "NIST Chemistry WebBook";   DrugBank:DB01917;   ECMDB:ECMDB01414;   Gmelin:1715 "Gmelin";   HMDB:HMDB0001414;   KEGG:C00134;   KNApSAcK:C00001428
 xref_mesh: MESH:D011700
 xref: MetaCyc:PUTRESCINE;   PDBeChem:PUT;   PMID:12053479 "Europe PMC";   PMID:15453685 "Europe PMC";   PMID:16346523 "Europe PMC";   PMID:18721677 "Europe PMC";   PMID:22735334 "Europe PMC";   PMID:24331418 "Europe PMC";   PMID:24820075 "Europe PMC";   PMID:24864091 "Europe PMC";   Reaxys:605282 "Reaxys";   Wikipedia:Putrescine;   YMDB:YMDB00132
 cyclic_relationship: is_conjugate_base_of CHEBI:326268


show annotations for term's descendants       view all columns           Sort by:
 
putrescine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adrb1 adrenoceptor beta 1 JBrowse link 1 277,537,585 277,538,985 RGD:6480464
G Adrb2 adrenoceptor beta 2 JBrowse link 18 57,513,792 57,515,834 RGD:6480464
G Amd1 adenosylmethionine decarboxylase 1 JBrowse link 20 45,384,000 45,399,694 RGD:6480464
G Aoc1 amine oxidase, copper containing 1 JBrowse link 4 78,496,043 78,515,582 RGD:6480464
G Bcl2 BCL2, apoptosis regulator JBrowse link 13 26,605,426 26,769,374 RGD:6480464
G Casp3 caspase 3 JBrowse link 16 48,845,011 48,863,249 RGD:6480464
G Casp9 caspase 9 JBrowse link 5 160,356,211 160,373,774 RGD:6480464
G Eif3b eukaryotic translation initiation factor 3, subunit B JBrowse link 12 16,285,730 16,310,190 RGD:6480464
G Elavl1 ELAV like RNA binding protein 1 JBrowse link 12 2,461,502 2,502,432 RGD:6480464
G Fos Fos proto-oncogene, AP-1 transcription factor subunit JBrowse link 6 109,300,433 109,303,299 RGD:6480464
G Hnrnpd heterogeneous nuclear ribonucleoprotein D JBrowse link 14 11,256,163 11,274,684 RGD:6480464
G Jund JunD proto-oncogene, AP-1 transcription factor subunit JBrowse link 16 20,485,028 20,486,707 RGD:6480464
G Myc MYC proto-oncogene, bHLH transcription factor JBrowse link 7 102,586,313 102,591,240 RGD:6480464
G Nos2 nitric oxide synthase 2 JBrowse link 10 66,188,290 66,221,621 RGD:6480464
G Odc1 ornithine decarboxylase 1 JBrowse link 6 42,852,529 42,859,142 RGD:6480464
G Tgm2 transglutaminase 2 JBrowse link 3 154,597,165 154,627,257 RGD:6480464
G Tia1 TIA1 cytotoxic granule-associated RNA binding protein JBrowse link 4 118,207,845 118,238,246 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19741
    role 19688
      chemical role 19199
        antioxidant 14093
          putrescine 17
            N-(4-aminobutyl)dabigatranamide 0
            N-substituted putrescine + 0
            gamma-glutamylputrescine + 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19741
    subatomic particle 19737
      composite particle 19737
        hadron 19737
          baryon 19737
            nucleon 19737
              atomic nucleus 19737
                atom 19737
                  main group element atom 19622
                    main group molecular entity 19622
                      s-block molecular entity 19388
                        hydrogen molecular entity 19377
                          hydrides 18283
                            inorganic hydride 17204
                              pnictogen hydride 17166
                                nitrogen hydride 17001
                                  azane 16694
                                    ammonia 16691
                                      organic amino compound 16690
                                        polyamine 8073
                                          diamine 8000
                                            primary diamine 5609
                                              alkane-alpha,omega-diamine 3716
                                                putrescine 17
                                                  N-(4-aminobutyl)dabigatranamide 0
                                                  N-substituted putrescine + 0
                                                  gamma-glutamylputrescine + 0
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.