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ONTOLOGY REPORT - ANNOTATIONS


Term:glycocholic acid
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Accession:CHEBI:17687 term browser browse the term
Definition:A bile acid glycine conjugate having cholic acid as the bile acid component.
Synonyms:exact_synonym: N-(3alpha,7alpha,12alpha-trihydroxy-5beta-cholan-24-oyl)glycine
 related_synonym: 3alpha,7alpha,12alpha-trihydroxy-5beta-cholan-24-oylglycine;   Formula=C26H43NO6;   InChI=1S/C26H43NO6/c1-14(4-7-22(31)27-13-23(32)33)17-5-6-18-24-19(12-21(30)26(17,18)3)25(2)9-8-16(28)10-15(25)11-20(24)29/h14-21,24,28-30H,4-13H2,1-3H3,(H,27,31)(H,32,33)/t14-,15+,16-,17-,18+,19+,20-,21+,24+,25+,26-/m1/s1;   InChIKey=RFDAIACWWDREDC-FRVQLJSFSA-N;   N-[(3alpha,5beta,7alpha,12alpha)-3,7,12-trihydroxy-24-oxocholan-24-yl]glycine;   N-choloylglycine;   SMILES=C[C@H](CCC(=O)NCC(O)=O)[C@H]1CC[C@H]2[C@@H]3[C@H](O)C[C@@H]4C[C@H](O)CC[C@]4(C)[C@H]3C[C@H](O)[C@]12C
 alt_id: CHEBI:11894;   CHEBI:20215;   CHEBI:24378;   CHEBI:42804;   CHEBI:5464
 xref: Beilstein:2955826 "Beilstein";   CAS:475-31-0 "ChemIDplus";   CAS:475-31-0 "KEGG COMPOUND";   CAS:475-31-0 "NIST Chemistry WebBook";   DrugBank:DB02691;   HMDB:HMDB0000138;   KEGG:C01921;   KNApSAcK:C00030410;   LINCS:LSM-3222;   LIPID_MAPS_instance:LMST05030001 "LIPID MAPS"
 xref_mesh: MESH:D006000
 xref: MetaCyc:GLYCOCHOLIC_ACID;   PDBeChem:GCH;   PMID:22770225 "Europe PMC";   Reaxys:2955826 "Reaxys";   Wikipedia:Glycocholic_acid
 cyclic_relationship: is_conjugate_acid_of CHEBI:29746


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glycocholic acid term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcb11 ATP binding cassette subfamily B member 11 JBrowse link 3 55,480,024 55,587,946 RGD:6480464
G Abcc1 ATP binding cassette subfamily C member 1 JBrowse link 10 549,537 672,235 RGD:6480464
G Il10 interleukin 10 JBrowse link 13 47,738,933 47,743,392 RGD:6480464
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 JBrowse link 7 30,003,429 30,162,095 RGD:6480464
G Por cytochrome p450 oxidoreductase JBrowse link 12 23,998,411 24,017,063 RGD:6480464
G Sod2 superoxide dismutase 2 JBrowse link 1 47,914,757 47,921,587 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19716
    role 19663
      biological role 19661
        molecular messenger 18042
          neurotransmitter 6091
            glycine 834
              glycine derivative 828
                bile acid glycine conjugate 35
                  glycocholic acid 6
Path 2
Term Annotations click to browse term
  CHEBI ontology 19716
    subatomic particle 19712
      composite particle 19712
        hadron 19712
          baryon 19712
            nucleon 19712
              atomic nucleus 19712
                atom 19712
                  main group element atom 19598
                    p-block element atom 19598
                      carbon group element atom 19486
                        carbon atom 19480
                          organic molecular entity 19480
                            organic molecule 19402
                              organic cyclic compound 19158
                                organic polycyclic compound 16027
                                  steroid 12770
                                    steroid fundamental parent 12394
                                      cholane 867
                                        cholanoid 867
                                          cholanic acids 867
                                            cholanic acid 867
                                              5beta-cholanic acid 867
                                                hydroxy-5beta-cholanic acid 867
                                                  dihydroxy-5beta-cholanic acid 715
                                                    chenodeoxycholic acid 385
                                                      glycochenodeoxycholic acid 28
                                                        glycocholic acid 6
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.