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ONTOLOGY REPORT - ANNOTATIONS


Term:chloramphenicol
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Accession:CHEBI:17698 term browser browse the term
Definition:An organochlorine compound that is dichloro-substituted acetamide containing a nitrobenzene ring, an amide bond and two alcohol functions.
Synonyms:exact_synonym: 2,2-dichloro-N-[(1R,2R)-2-hydroxy-1-(hydroxymethyl)-2-(4-nitrophenyl)ethyl]acetamide
 related_synonym: Chloramex;   Chlorocid;   Chlorocol;   Chloromycetin;   D-(-)-2,2-dichloro-N-(beta-hydroxy-alpha-(hydroxymethyl)-p-nitrophenylethyl)acetamide;   D-(-)-threo-1-p-nitrophenyl-2-dichloroacetylamino-1,3-propanediol;   Fenicol;   Formula=C11H12Cl2N2O5;   Globenicol;   Halomycetin;   InChI=1S/C11H12Cl2N2O5/c12-10(13)11(18)14-8(5-16)9(17)6-1-3-7(4-2-6)15(19)20/h1-4,8-10,16-17H,5H2,(H,14,18)/t8-,9-/m1/s1;   InChIKey=WIIZWVCIJKGZOK-RKDXNWHRSA-N;   Oleomycetin;   SMILES=C1=C([C@H]([C@H](NC(C(Cl)Cl)=O)CO)O)C=CC(=C1)[N+]([O-])=O;   Sificetina;   chloramphenicolum;   chlornitromycin;   cloramfenicol;   laevomycetinum;   levomicetina;   levomycetin
 alt_id: CHEBI:13965;   CHEBI:23106;   CHEBI:23108;   CHEBI:3603;   CHEBI:47327
 xref: Beilstein:2225532 "Beilstein";   CAS:56-75-7 "ChemIDplus";   CAS:56-75-7 "KEGG COMPOUND";   DrugBank:DB00446;   Drug_Central:589 "DrugCentral";   KEGG:C00918;   KEGG:D00104;   LINCS:LSM-5256
 xref_mesh: MESH:D002701
 xref: PDBeChem:CLM;   PMID:11468347 "Europe PMC";   PMID:12217690 "Europe PMC";   PMID:16659995 "Europe PMC";   PMID:16897441 "Europe PMC";   PMID:17217404 "Europe PMC";   PMID:17692887 "Europe PMC";   PMID:18559535 "Europe PMC";   PMID:18657290 "Europe PMC";   PMID:18794387 "Europe PMC";   PMID:23142491 "Europe PMC";   PMID:23317719 "Europe PMC";   PMID:23395526 "Europe PMC";   PMID:23494278 "Europe PMC";   PMID:23512826 "Europe PMC";   PMID:657786 "Europe PMC";   PMID:6653106 "Europe PMC";   Patent:GB795131;   Patent:GB796901;   Patent:US2483871;   Patent:US2483884;   Patent:US2483892;   Patent:US2839577;   VSDB:1835;   Wikipedia:Chloramphenicol


show annotations for term's descendants       view all columns           Sort by:
 
chloramphenicol term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Alpl alkaline phosphatase, biomineralization associated JBrowse link 5 156,086,496 156,141,513 RGD:6480464
G Atg12 autophagy related 12 JBrowse link 18 40,721,799 40,732,143 RGD:6480464
G Casp3 caspase 3 JBrowse link 16 48,845,011 48,863,249 RGD:6480464
G Cat catalase JBrowse link 3 93,379,872 93,412,058 RGD:6480464
G Ccnb1 cyclin B1 JBrowse link 2 30,782,133 30,791,106 RGD:6480464
G Cdkn1a cyclin-dependent kinase inhibitor 1A JBrowse link 20 6,348,422 6,358,864 RGD:6480464
G Cdkn2a cyclin-dependent kinase inhibitor 2A JBrowse link 5 107,823,323 107,832,405 RGD:6480464
G Col1a1 collagen type I alpha 1 chain JBrowse link 10 82,745,801 82,762,790 RGD:6480464
G Cyp2c6v1 cytochrome P450, family 2, subfamily C, polypeptide 6, variant 1 JBrowse link 1 147,713,879 147,814,410 RGD:6480464
G Esr1 estrogen receptor 1 JBrowse link 1 41,192,029 41,594,799 RGD:6480464
G Faslg Fas ligand JBrowse link 13 79,696,811 79,717,581 RGD:6480464
G Jun Jun proto-oncogene, AP-1 transcription factor subunit JBrowse link 5 114,011,184 114,014,277 RGD:6480464
G Mmp10 matrix metallopeptidase 10 JBrowse link 8 5,734,348 5,742,243 RGD:6480464
G Mmp13 matrix metallopeptidase 13 JBrowse link 8 5,522,739 5,533,018 RGD:6480464
G Mmp3 matrix metallopeptidase 3 JBrowse link 8 5,676,608 5,698,579 RGD:6480464
G Mt-co1 mitochondrially encoded cytochrome c oxidase I JBrowse link MT 5,323 6,867 RGD:6480464
G Mt-nd1 mitochondrially encoded NADH dehydrogenase 1 JBrowse link MT 2,740 3,694 RGD:6480464
G Parp1 poly (ADP-ribose) polymerase 1 JBrowse link 13 98,857,255 98,889,444 RGD:6480464
G Pgd phosphogluconate dehydrogenase JBrowse link 5 165,966,128 165,982,327 RGD:6480464
G Polg DNA polymerase gamma, catalytic subunit JBrowse link 1 141,172,117 141,188,893 RGD:6480464
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link 13 67,351,230 67,356,920 RGD:6480464
G Rrm2b ribonucleotide reductase regulatory TP53 inducible subunit M2B JBrowse link 7 76,750,045 76,780,817 RGD:6480464
G Slc22a7 solute carrier family 22 member 7 JBrowse link 9 16,925,321 16,931,119 RGD:6480464
G Slc47a1 solute carrier family 47 member 1 JBrowse link 10 47,631,425 47,685,379 RGD:6480464
G Slc47a2 solute carrier family 47 member 2 JBrowse link 10 47,587,909 47,631,373 RGD:6480464
G Tfam transcription factor A, mitochondrial JBrowse link 20 18,594,057 18,606,106 RGD:6480464
G Ugt2b17 UDP glucuronosyltransferase family 2 member B17 JBrowse link 14 22,724,399 22,736,148 RGD:6480464
chloramphenicol palmitate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gstp1 glutathione S-transferase pi 1 JBrowse link 1 219,291,679 219,294,147 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19654
    role 19598
      biological role 19596
        antimicrobial agent 17143
          chloramphenicol 28
            O(3)-(2-L-lysino-2-oxoethyl)-O(1)-[4-(trifluoroacetamido)benzylcarbonyl]chloramphenicol 0
            O-(4-trifluoroacetamidobenzylphosphonyl)chloramphenicol 0
            chloramphenicol 3-acetate 0
            chloramphenicol palmitate 1
Path 2
Term Annotations click to browse term
  CHEBI ontology 19654
    subatomic particle 19650
      composite particle 19650
        hadron 19650
          baryon 19650
            nucleon 19650
              atomic nucleus 19650
                atom 19650
                  main group element atom 19531
                    p-block element atom 19531
                      carbon group element atom 19413
                        carbon atom 19405
                          organic molecular entity 19405
                            organic group 18331
                              organic divalent group 18321
                                organodiyl group 18321
                                  carbonyl group 18209
                                    carbonyl compound 18209
                                      carboxylic acid 17908
                                        carboacyl group 16930
                                          univalent carboacyl group 16930
                                            carbamoyl group 16610
                                              carboxamide 16610
                                                chloramphenicol 28
                                                  O(3)-(2-L-lysino-2-oxoethyl)-O(1)-[4-(trifluoroacetamido)benzylcarbonyl]chloramphenicol 0
                                                  O-(4-trifluoroacetamidobenzylphosphonyl)chloramphenicol 0
                                                  chloramphenicol 3-acetate 0
                                                  chloramphenicol palmitate 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.