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ONTOLOGY REPORT - ANNOTATIONS


Term:tocopherol
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Accession:CHEBI:27013 term browser browse the term
Definition:A collective name for a group of closely related lipids that contain a chroman-6-ol nucleus substituted at position 2 by a methyl group and by a saturated hydrocarbon chain consisting of three isoprenoid units. They are designated as alpha-, beta-, gamma-, and delta-tocopherol depending on the number and position of additional methyl substituents on the aromatic ring. Tocopherols occur in vegetable oils and vegetable oil products, almost exclusively with R,R,R configuration. Tocotrienols differ from tocopherols only in having three double bonds in the hydrocarbon chain.
Synonyms:related_synonym: Methyltocols;   Tocopherols;   tocoferol;   tocoferoles
 xref: CAS:1406-66-2
 xref_mesh: MESH:D024505
 xref: Wikipedia:Tocopherol


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tocopherol term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcc1 ATP-binding cassette, sub-family C (CFTR/MRP), member 1 JBrowse link 16 14,361,453 14,474,878 RGD:6480464
G App amyloid beta (A4) precursor protein JBrowse link 16 84,952,666 85,175,255 RGD:6480464
G Ar androgen receptor JBrowse link X 98,148,757 98,323,218 RGD:6480464
G Arf3 ADP-ribosylation factor 3 JBrowse link 15 98,737,624 98,763,118 RGD:6480464
G Aspm abnormal spindle microtubule assembly JBrowse link 1 139,454,188 139,494,088 RGD:6480464
G Atp1a2 ATPase, Na+/K+ transporting, alpha 2 polypeptide JBrowse link 1 172,271,709 172,298,064 RGD:6480464
G Atp1b2 ATPase, Na+/K+ transporting, beta 2 polypeptide JBrowse link 11 69,599,728 69,605,978 RGD:6480464
G Aurka aurora kinase A JBrowse link 2 172,356,190 172,370,886 RGD:6480464
G Bax BCL2-associated X protein JBrowse link 7 45,461,695 45,466,903 RGD:6480464
G Bcl2 B cell leukemia/lymphoma 2 JBrowse link 1 106,538,176 106,714,290 RGD:6480464
G Bcl2l1 BCL2-like 1 JBrowse link 2 152,758,732 152,833,803 RGD:6480464
G Birc5 baculoviral IAP repeat-containing 5 JBrowse link 11 117,849,237 117,855,743 RGD:6480464
G Camk2g calcium/calmodulin-dependent protein kinase II gamma JBrowse link 14 20,734,873 20,794,157 RGD:6480464
G Ccnb2 cyclin B2 JBrowse link 9 70,407,689 70,421,554 RGD:6480464
G Ccnd1 cyclin D1 JBrowse link 7 144,929,931 144,939,831 RGD:6480464
G Ccnd3 cyclin D3 JBrowse link 17 47,505,051 47,599,689 RGD:6480464
G Ccne1 cyclin E1 JBrowse link 7 38,097,984 38,107,490 RGD:6480464
G Cdc6 cell division cycle 6 JBrowse link 11 98,907,709 98,923,942 RGD:6480464
G Cdk1 cyclin-dependent kinase 1 JBrowse link 10 69,335,146 69,352,912 RGD:6480464
G Cdk2 cyclin-dependent kinase 2 JBrowse link 10 128,697,938 128,705,051 RGD:6480464
G Cdk4 cyclin-dependent kinase 4 JBrowse link 10 127,063,535 127,067,288 RGD:6480464
G Cdk5r1 cyclin-dependent kinase 5, regulatory subunit 1 (p35) JBrowse link 11 80,477,023 80,481,184 RGD:6480464
G Clec4e C-type lectin domain family 4, member e JBrowse link 6 123,281,789 123,289,871 RGD:6480464
G Cplx1 complexin 1 JBrowse link 5 108,518,554 108,550,027 RGD:6480464
G Cplx2 complexin 2 JBrowse link 13 54,301,964 54,383,923 RGD:6480464
G Csf1r colony stimulating factor 1 receptor JBrowse link 18 61,105,572 61,131,139 RGD:6480464
G Csrp2 cysteine and glycine-rich protein 2 JBrowse link 10 110,920,176 110,939,514 RGD:6480464
G Dnajc5 DnaJ heat shock protein family (Hsp40) member C5 JBrowse link 2 181,518,858 181,552,886 RGD:6480464
G E2f1 E2F transcription factor 1 JBrowse link 2 154,559,400 154,569,892 RGD:6480464
G Egr1 early growth response 1 JBrowse link 18 34,861,207 34,864,956 RGD:6480464
G Fcer1a Fc receptor, IgE, high affinity I, alpha polypeptide JBrowse link 1 173,221,269 173,227,232 RGD:6480464
G Fes feline sarcoma oncogene JBrowse link 7 80,377,758 80,387,954 RGD:6480464
G Fgf1 fibroblast growth factor 1 JBrowse link 18 38,838,672 38,929,470 RGD:6480464
G Fgf2 fibroblast growth factor 2 JBrowse link 3 37,348,477 37,410,106 RGD:6480464
G Fgfr1 fibroblast growth factor receptor 1 JBrowse link 8 25,518,759 25,575,718 RGD:6480464
G Fkbp9 FK506 binding protein 9 JBrowse link 6 56,832,059 56,879,360 RGD:6480464
G Fos FBJ osteosarcoma oncogene JBrowse link 12 85,473,890 85,477,274 RGD:6480464
G Fpr-rs4 formyl peptide receptor, related sequence 4 JBrowse link 17 18,021,733 18,022,704 RGD:6480464
G Gria2 glutamate receptor, ionotropic, AMPA2 (alpha 2) JBrowse link 3 80,681,450 80,804,227 RGD:6480464
G Grin1 glutamate receptor, ionotropic, NMDA1 (zeta 1) JBrowse link 2 25,291,177 25,319,187 RGD:6480464
G Gsto1 glutathione S-transferase omega 1 JBrowse link 19 47,854,973 47,864,790 RGD:6480464
G Haspin histone H3 associated protein kinase JBrowse link 11 73,135,484 73,138,294 RGD:6480464
G Jun jun proto-oncogene JBrowse link 4 95,049,036 95,052,222 RGD:6480464
G Kif20a kinesin family member 20A JBrowse link 18 34,624,624 34,633,277 RGD:6480464
G Kif4 kinesin family member 4 JBrowse link X 100,626,065 100,727,271 RGD:6480464
G Mcl1 myeloid cell leukemia sequence 1 JBrowse link 3 95,656,944 95,663,179 RGD:6480464
G Myc myelocytomatosis oncogene JBrowse link 15 61,985,341 61,990,361 RGD:6480464
G Napb N-ethylmaleimide sensitive fusion protein attachment protein beta JBrowse link 2 148,693,985 148,732,425 RGD:6480464
G Nsf N-ethylmaleimide sensitive fusion protein JBrowse link 11 103,821,782 103,954,056 RGD:6480464
G Pcna proliferating cell nuclear antigen JBrowse link 2 132,249,286 132,253,180 RGD:6480464
G Ppp3ca protein phosphatase 3, catalytic subunit, alpha isoform JBrowse link 3 136,669,714 136,937,727 RGD:6480464
G Prtn3 proteinase 3 JBrowse link 10 79,879,667 79,883,174 RGD:6480464
G Ptpro protein tyrosine phosphatase, receptor type, O JBrowse link 6 137,252,299 137,464,634 RGD:6480464
G Rab11b RAB11B, member RAS oncogene family JBrowse link 17 33,742,484 33,760,486 RGD:6480464
G Rab3a RAB3A, member RAS oncogene family JBrowse link 8 70,754,703 70,758,608 RGD:6480464
G Rab6b RAB6B, member RAS oncogene family JBrowse link 9 103,111,667 103,185,276 RGD:6480464
G Rb1 RB transcriptional corepressor 1 JBrowse link 14 73,192,858 73,325,951 RGD:6480464
G Rrm1 ribonucleotide reductase M1 JBrowse link 7 102,441,695 102,469,771 RGD:6480464
G Rrm2 ribonucleotide reductase M2 JBrowse link 12 24,708,254 24,714,146 RGD:6480464
G Snca synuclein, alpha JBrowse link 6 60,731,573 60,829,855 RGD:6480464
G Sncb synuclein, beta JBrowse link 13 54,758,860 54,766,622 RGD:6480464
G Stx1a syntaxin 1A (brain) JBrowse link 5 135,023,482 135,051,100 RGD:6480464
G Stxbp1 syntaxin binding protein 1 JBrowse link 2 32,787,607 32,847,237 RGD:6480464
G Sv2a synaptic vesicle glycoprotein 2 a JBrowse link 3 96,181,227 96,195,183 RGD:6480464
G Syn1 synapsin I JBrowse link X 20,860,511 20,920,918 RGD:6480464
G Syn2 synapsin II JBrowse link 6 115,134,902 115,282,626 RGD:6480464
G Syngr1 synaptogyrin 1 JBrowse link 15 80,091,334 80,119,501 RGD:6480464
G Syp synaptophysin JBrowse link X 7,638,580 7,653,256 RGD:6480464
G Syt11 synaptotagmin XI JBrowse link 3 88,744,699 88,775,159 RGD:6480464
G Syt13 synaptotagmin XIII JBrowse link 2 92,915,101 92,956,051 RGD:6480464
G Tnf tumor necrosis factor JBrowse link 17 35,199,367 35,202,007 RGD:6480464
G Tnfaip2 tumor necrosis factor, alpha-induced protein 2 JBrowse link 12 111,442,450 111,455,018 RGD:6480464
G Trp53 transformation related protein 53 JBrowse link 11 69,580,348 69,591,873 RGD:6480464
G Ttc3 tetratricopeptide repeat domain 3 JBrowse link 16 94,370,625 94,469,222 RGD:6480464
G Vamp1 vesicle-associated membrane protein 1 JBrowse link 6 125,215,581 125,222,306 RGD:6480464
G Vamp2 vesicle-associated membrane protein 2 JBrowse link 11 69,088,528 69,092,381 RGD:6480464
G Vdr vitamin D (1,25-dihydroxyvitamin D3) receptor JBrowse link 15 97,854,427 97,908,296 RGD:6480464
(+)-alpha-tocopherol term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G A930009A15Rik RIKEN cDNA A930009A15 gene JBrowse link 10 115,569,986 115,582,454 RGD:6480464
G Abcb1a ATP-binding cassette, sub-family B (MDR/TAP), member 1A JBrowse link 5 8,567,091 8,748,575 RGD:6480464
G Acat1 acetyl-Coenzyme A acetyltransferase 1 JBrowse link 9 53,580,522 53,610,350 RGD:6480464
G Ache acetylcholinesterase JBrowse link 5 137,288,247 137,294,466 RGD:6480464
G Acvrl1 activin A receptor, type II-like 1 JBrowse link 15 101,128,522 101,145,336 RGD:6480464
G Agt angiotensinogen (serpin peptidase inhibitor, clade A, member 8) JBrowse link 8 124,556,587 124,569,706 RGD:6480464
G Akr1b3 aldo-keto reductase family 1, member B3 (aldose reductase) JBrowse link 6 34,303,930 34,317,489 RGD:6480464
G Akt1 thymoma viral proto-oncogene 1 JBrowse link 12 112,653,821 112,674,884 RGD:6480464
G Alad aminolevulinate, delta-, dehydratase JBrowse link 4 62,505,984 62,520,063 RGD:6480464
G Alas1 aminolevulinic acid synthase 1 JBrowse link 9 106,233,455 106,247,954 RGD:6480464
G Alb albumin JBrowse link 5 90,460,870 90,476,602 RGD:6480464
G Ano6 anoctamin 6 JBrowse link 15 95,790,843 95,975,472 RGD:6480464
G Apex2 apurinic/apyrimidinic endonuclease 2 JBrowse link X 150,426,974 150,588,206 RGD:6480464
G Apoa1 apolipoprotein A-I JBrowse link 9 46,228,630 46,230,469 RGD:6480464
G Apob apolipoprotein B JBrowse link 12 7,977,629 8,016,839 RGD:6480464
G App amyloid beta (A4) precursor protein JBrowse link 16 84,952,666 85,175,255 RGD:6480464
G Atf2 activating transcription factor 2 JBrowse link 2 73,816,509 73,892,677 RGD:6480464
G Bace1 beta-site APP cleaving enzyme 1 JBrowse link 9 45,838,545 45,862,484 RGD:6480464
G Bad BCL2-associated agonist of cell death JBrowse link 19 6,941,861 6,951,905 RGD:6480464
G Bax BCL2-associated X protein JBrowse link 7 45,461,695 45,466,903 RGD:6480464
G Bche butyrylcholinesterase JBrowse link 3 73,635,805 73,708,436 RGD:6480464
G Bcl2 B cell leukemia/lymphoma 2 JBrowse link 1 106,538,176 106,714,290 RGD:6480464
G Bcl2l1 BCL2-like 1 JBrowse link 2 152,758,732 152,833,803 RGD:6480464
G Bdnf brain derived neurotrophic factor JBrowse link 2 109,674,700 109,727,043 RGD:6480464
G Canx calnexin JBrowse link 11 50,293,957 50,325,673 RGD:6480464
G Casp3 caspase 3 JBrowse link 8 46,617,291 46,639,698 RGD:6480464
G Casp7 caspase 7 JBrowse link 19 56,396,833 56,442,348 RGD:6480464
G Casp8 caspase 8 JBrowse link 1 58,795,233 58,847,503 RGD:6480464
G Casp9 caspase 9 JBrowse link 4 141,793,612 141,815,978 RGD:6480464
G Cat catalase JBrowse link 2 103,453,904 103,485,153 RGD:6480464
G Cav1 caveolin 1, caveolae protein JBrowse link 6 17,306,335 17,341,328 RGD:6480464
G Ccl2 chemokine (C-C motif) ligand 2 JBrowse link 11 82,035,577 82,037,452 RGD:6480464
G Ccnd1 cyclin D1 JBrowse link 7 144,929,931 144,939,831 RGD:6480464
G Ccnd2 cyclin D2 JBrowse link 6 127,125,162 127,152,188 RGD:6480464
G Cd36 CD36 molecule JBrowse link 5 17,781,690 17,888,959 RGD:6480464
G Cdkn1a cyclin-dependent kinase inhibitor 1A (P21) JBrowse link 17 29,090,979 29,100,722 RGD:6480464
G Cftr cystic fibrosis transmembrane conductance regulator JBrowse link 6 18,170,687 18,322,770 RGD:6480464
G Chat choline acetyltransferase JBrowse link 14 32,408,203 32,465,909 RGD:6480464
G Clcn3 chloride channel, voltage-sensitive 3 JBrowse link 8 60,910,389 60,983,317 RGD:6480464
G Cldn2 claudin 2 JBrowse link X 139,800,808 139,811,386 RGD:6480464
G Cpt1a carnitine palmitoyltransferase 1a, liver JBrowse link 19 3,322,326 3,385,735 RGD:6480464
G Crabp2 cellular retinoic acid binding protein II JBrowse link 3 87,948,693 87,953,372 RGD:6480464
G Creb1 cAMP responsive element binding protein 1 JBrowse link 1 64,532,794 64,604,548 RGD:6480464
G Crp C-reactive protein, pentraxin-related JBrowse link 1 172,698,056 172,699,966 RGD:6480464
G Cryaa crystallin, alpha A JBrowse link 17 31,677,931 31,681,730 RGD:6480464
G Ctsd cathepsin D JBrowse link 7 142,375,910 142,387,827 RGD:6480464
G Cxcl1 chemokine (C-X-C motif) ligand 1 JBrowse link 5 90,891,245 90,893,121 RGD:6480464
G Cxcl15 chemokine (C-X-C motif) ligand 15 JBrowse link 5 90,794,534 90,803,067 RGD:6480464
G Cxcl2 chemokine (C-X-C motif) ligand 2 JBrowse link 5 90,903,899 90,905,938 RGD:6480464
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 JBrowse link 9 57,687,928 57,703,824 RGD:6480464
G Cyp1a2 cytochrome P450, family 1, subfamily a, polypeptide 2 JBrowse link 9 57,676,937 57,683,655 RGD:6480464
G Cyp2b10 cytochrome P450, family 2, subfamily b, polypeptide 10 JBrowse link 7 25,897,658 25,926,624 RGD:6480464
G Cyp2b9 cytochrome P450, family 2, subfamily b, polypeptide 9 JBrowse link 7 26,173,350 26,210,661 RGD:6480464
G Cyp2c29 cytochrome P450, family 2, subfamily c, polypeptide 29 JBrowse link 19 39,287,044 39,330,713 RGD:6480464
G Cyp2e1 cytochrome P450, family 2, subfamily e, polypeptide 1 JBrowse link 7 140,763,819 140,774,990 RGD:6480464
G Cyp3a11 cytochrome P450, family 3, subfamily a, polypeptide 11 JBrowse link 5 145,854,607 145,879,854 RGD:6480464
G Cyp3a13 cytochrome P450, family 3, subfamily a, polypeptide 13 JBrowse link 5 137,892,933 137,925,610 RGD:6480464
G Ddit3 DNA-damage inducible transcript 3 JBrowse link 10 127,290,793 127,296,291 RGD:6480464
G Diablo diablo, IAP-binding mitochondrial protein JBrowse link 5 123,511,330 123,524,164 RGD:6480464
G Eif2a eukaryotic translation initiation factor 2A JBrowse link 3 58,525,821 58,557,501 RGD:6480464
G Esr1 estrogen receptor 1 (alpha) JBrowse link 10 4,611,989 5,005,633 RGD:6480464
G Esr2 estrogen receptor 2 (beta) JBrowse link 12 76,120,419 76,177,259 RGD:6480464
G Fasl Fas ligand (TNF superfamily, member 6) JBrowse link 1 161,780,691 161,788,495 RGD:6480464
G Fbl fibrillarin JBrowse link 7 28,168,893 28,179,269 RGD:6480464
G Fmo1 flavin containing monooxygenase 1 JBrowse link 1 162,829,561 162,866,610 RGD:6480464
G Fn1 fibronectin 1 JBrowse link 1 71,585,473 71,653,280 RGD:6480464
G Fyn Fyn proto-oncogene JBrowse link 10 39,369,743 39,565,381 RGD:6480464
G Gadd45a growth arrest and DNA-damage-inducible 45 alpha JBrowse link 6 67,035,096 67,037,407 RGD:6480464
G Gclc glutamate-cysteine ligase, catalytic subunit JBrowse link 9 77,754,535 77,794,489 RGD:6480464
G Gclm glutamate-cysteine ligase, modifier subunit JBrowse link 3 122,245,487 122,267,215 RGD:6480464
G Gfap glial fibrillary acidic protein JBrowse link 11 102,887,336 102,897,200 RGD:6480464
G Gnai2 guanine nucleotide binding protein (G protein), alpha inhibiting 2 JBrowse link 9 107,614,125 107,635,391 RGD:6480464
G Gnai3 guanine nucleotide binding protein (G protein), alpha inhibiting 3 JBrowse link 3 108,107,275 108,146,152 RGD:6480464
G Gpt glutamic pyruvic transaminase, soluble JBrowse link 15 76,696,726 76,699,675 RGD:6480464
G Gpx4 glutathione peroxidase 4 JBrowse link 10 80,047,166 80,056,439 RGD:6480464
G Gsr glutathione reductase JBrowse link 8 33,653,238 33,698,162 RGD:6480464
G Gstm1 glutathione S-transferase, mu 1 JBrowse link 3 108,012,250 108,017,973 RGD:6480464
G Gstt1 glutathione S-transferase, theta 1 JBrowse link 10 75,783,813 75,798,584 RGD:6480464
G Gusb glucuronidase, beta JBrowse link 5 129,989,011 130,003,049 RGD:6480464
G Hal histidine ammonia lyase JBrowse link 10 93,488,768 93,516,761 RGD:6480464
G Hmgcr 3-hydroxy-3-methylglutaryl-Coenzyme A reductase JBrowse link 13 96,648,962 96,670,936 RGD:6480464
G Hmox1 heme oxygenase 1 JBrowse link 8 75,093,618 75,100,593 RGD:6480464
G Hp haptoglobin JBrowse link 8 109,575,128 109,579,172 RGD:6480464
G Hsd17b3 hydroxysteroid (17-beta) dehydrogenase 3 JBrowse link 13 64,058,274 64,089,262 RGD:6480464
G Hsd3b2 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2 JBrowse link 3 98,711,107 98,724,543 RGD:6480464
G Hspa1b heat shock protein 1B JBrowse link 17 34,956,429 34,959,238 RGD:6480464
G Icam1 intercellular adhesion molecule 1 JBrowse link 9 21,015,940 21,028,814 RGD:6480464
G Ifng interferon gamma JBrowse link 10 118,441,046 118,445,894 RGD:6480464
G Igfbp5 insulin-like growth factor binding protein 5 JBrowse link 1 72,858,065 72,874,865 RGD:6480464
G Il10 interleukin 10 JBrowse link 1 131,019,845 131,024,970 RGD:6480464
G Il1a interleukin 1 alpha JBrowse link 2 129,299,609 129,310,186 RGD:6480464
G Il1b interleukin 1 beta JBrowse link 2 129,364,569 129,371,164 RGD:6480464
G Il6 interleukin 6 JBrowse link 5 30,013,114 30,019,975 RGD:6480464
G Jun jun proto-oncogene JBrowse link 4 95,049,036 95,052,222 RGD:6480464
G Kcnh2 potassium voltage-gated channel, subfamily H (eag-related), member 2 JBrowse link 5 24,319,589 24,351,684 RGD:6480464
G Lcat lecithin cholesterol acyltransferase JBrowse link 8 105,939,551 105,943,402 RGD:6480464
G Lck lymphocyte protein tyrosine kinase JBrowse link 4 129,548,344 129,573,641 RGD:6480464
G Ldha lactate dehydrogenase A JBrowse link 7 46,842,274 46,855,627 RGD:6480464
G Ldhb lactate dehydrogenase B JBrowse link 6 142,490,249 142,507,957 RGD:6480464
G Lyn LYN proto-oncogene, Src family tyrosine kinase JBrowse link 4 3,678,068 3,791,612 RGD:6480464
G Mapk1 mitogen-activated protein kinase 1 JBrowse link 16 16,983,382 17,047,453 RGD:6480464
G Mapk14 mitogen-activated protein kinase 14 JBrowse link 17 28,691,342 28,748,405 RGD:6480464
G Mapk3 mitogen-activated protein kinase 3 JBrowse link 7 126,759,626 126,765,816 RGD:6480464
G Mapk8 mitogen-activated protein kinase 8 JBrowse link 14 33,377,898 33,447,353 RGD:6480464
G Mapk9 mitogen-activated protein kinase 9 JBrowse link 11 49,846,728 49,886,421 RGD:6480464
G Mb myoglobin JBrowse link 15 77,015,487 77,050,668 RGD:6480464
G Mbp myelin basic protein JBrowse link 18 82,475,091 82,585,637 RGD:6480464
G Mgat3 mannoside acetylglucosaminyltransferase 3 JBrowse link 15 80,173,651 80,215,519 RGD:6480464
G Mki67 antigen identified by monoclonal antibody Ki 67 JBrowse link 7 135,689,784 135,716,450 RGD:6480464
G Mpo myeloperoxidase JBrowse link 11 87,793,784 87,804,412 RGD:6480464
G Muc5ac mucin 5, subtypes A and C, tracheobronchial/gastric JBrowse link 7 141,788,958 141,819,227 RGD:6480464
G Myc myelocytomatosis oncogene JBrowse link 15 61,985,341 61,990,361 RGD:6480464
G Nefh neurofilament, heavy polypeptide JBrowse link 11 4,938,754 4,948,064 RGD:6480464
G Nfe2l2 nuclear factor, erythroid derived 2, like 2 JBrowse link 2 75,675,513 75,704,663 RGD:6480464
G Nfkb1 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 JBrowse link 3 135,584,655 135,691,969 RGD:6480464
G Nfkbia nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, alpha JBrowse link 12 55,489,409 55,492,647 RGD:6480464
G Nos2 nitric oxide synthase 2, inducible JBrowse link 11 78,920,787 78,960,226 RGD:6480464
G Nos3 nitric oxide synthase 3, endothelial cell JBrowse link 5 24,364,816 24,384,474 RGD:6480464
G Nqo1 NAD(P)H dehydrogenase, quinone 1 JBrowse link 8 107,388,225 107,403,205 RGD:6480464
G Nr1i2 nuclear receptor subfamily 1, group I, member 2 JBrowse link 16 38,248,349 38,294,849 RGD:6480464
G Ogdh oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) JBrowse link 11 6,291,597 6,359,094 RGD:6480464
G Orm1 orosomucoid 1 JBrowse link 4 63,344,556 63,348,163 RGD:6480464
G Park7 Parkinson disease (autosomal recessive, early onset) 7 JBrowse link 4 150,897,133 150,909,921 RGD:6480464
G Parp1 poly (ADP-ribose) polymerase family, member 1 JBrowse link 1 180,568,891 180,600,999 RGD:6480464
G Pawr PRKC, apoptosis, WT1, regulator JBrowse link 10 108,332,189 108,414,391 RGD:6480464
G Pax3 paired box 3 JBrowse link 1 78,101,267 78,197,136 RGD:6480464
G Pck1 phosphoenolpyruvate carboxykinase 1, cytosolic JBrowse link 2 173,153,073 173,159,274 RGD:6480464
G Pcna proliferating cell nuclear antigen JBrowse link 2 132,249,286 132,253,180 RGD:6480464
G Pdgfrb platelet derived growth factor receptor, beta polypeptide JBrowse link 18 61,045,127 61,085,067 RGD:6480464
G Pgk1 phosphoglycerate kinase 1 JBrowse link X 106,187,100 106,203,699 RGD:6480464
G Plg plasminogen JBrowse link 17 12,378,609 12,419,384 RGD:6480464
G Pltp phospholipid transfer protein JBrowse link 2 164,839,518 164,857,708 RGD:6480464
G Ppara peroxisome proliferator activated receptor alpha JBrowse link 15 85,734,910 85,806,851 RGD:6480464
G Pparg peroxisome proliferator activated receptor gamma JBrowse link 6 115,360,879 115,490,404 RGD:6480464
G Ppia peptidylprolyl isomerase A JBrowse link 11 6,415,867 6,419,817 RGD:6480464
G Prl2c3 prolactin family 2, subfamily c, member 3 JBrowse link 13 12,790,816 12,800,093 RGD:6480464
G Psmc6 proteasome (prosome, macropain) 26S subunit, ATPase, 6 JBrowse link 14 45,329,823 45,349,074 RGD:6480464
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link 1 150,100,031 150,108,234 RGD:6480464
G Rela v-rel reticuloendotheliosis viral oncogene homolog A (avian) JBrowse link 19 5,637,442 5,648,134 RGD:6480464
G Rps6 ribosomal protein S6 JBrowse link 4 86,854,099 86,857,367 RGD:6480464
G Rxra retinoid X receptor alpha JBrowse link 2 27,676,445 27,763,319 RGD:6480464
G Sele selectin, endothelial cell JBrowse link 1 164,039,614 164,058,487 RGD:6480464
G Slc7a11 solute carrier family 7 (cationic amino acid transporter, y+ system), member 11 JBrowse link 3 50,364,936 50,499,087 RGD:6480464
G Smad4 SMAD family member 4 JBrowse link 18 73,634,790 73,703,791 RGD:6480464
G Snca synuclein, alpha JBrowse link 6 60,731,573 60,829,855 RGD:6480464
G Sod1 superoxide dismutase 1, soluble JBrowse link 16 90,220,762 90,226,333 RGD:6480464
G Sod2 superoxide dismutase 2, mitochondrial JBrowse link 17 13,007,839 13,018,119 RGD:6480464
G Srsf2 serine and arginine-rich splicing factor 2 JBrowse link 11 116,849,897 116,853,675 RGD:6480464
G Star steroidogenic acute regulatory protein JBrowse link 8 25,808,474 25,815,982 RGD:6480464
G Stat3 signal transducer and activator of transcription 3 JBrowse link 11 100,886,806 100,939,594 RGD:6480464
G Tert telomerase reverse transcriptase JBrowse link 13 73,626,911 73,649,843 RGD:6480464
G Tgfa transforming growth factor alpha JBrowse link 6 86,195,038 86,275,744 RGD:6480464
G Tgfb1 transforming growth factor, beta 1 JBrowse link 7 25,687,002 25,705,077 RGD:6480464
G Th tyrosine hydroxylase JBrowse link 7 142,892,779 142,899,995 RGD:6480464
G Tnf tumor necrosis factor JBrowse link 17 35,199,367 35,202,007 RGD:6480464
G Trp53 transformation related protein 53 JBrowse link 11 69,580,348 69,591,873 RGD:6480464
G Txn1 thioredoxin 1 JBrowse link 4 57,943,373 57,956,411 RGD:6480464
G Ugt1a1 UDP glucuronosyltransferase 1 family, polypeptide A1 JBrowse link 1 88,211,959 88,220,002 RGD:6480464
G Vcam1 vascular cell adhesion molecule 1 JBrowse link 3 116,110,020 116,129,688 RGD:6480464
G Xbp1 X-box binding protein 1 JBrowse link 11 5,520,641 5,525,993 RGD:6480464
G Xrcc6 X-ray repair complementing defective repair in Chinese hamster cells 6 JBrowse link 15 81,987,833 82,040,085 RGD:6480464
beta-tocopherol term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Casp3 caspase 3 JBrowse link 8 46,617,291 46,639,698 RGD:6480464
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 JBrowse link 9 57,687,928 57,703,824 RGD:6480464
G Esr1 estrogen receptor 1 (alpha) JBrowse link 10 4,611,989 5,005,633 RGD:6480464
G Esr2 estrogen receptor 2 (beta) JBrowse link 12 76,120,419 76,177,259 RGD:6480464
G Gclm glutamate-cysteine ligase, modifier subunit JBrowse link 3 122,245,487 122,267,215 RGD:6480464
G Gstm1 glutathione S-transferase, mu 1 JBrowse link 3 108,012,250 108,017,973 RGD:6480464
G Hmox1 heme oxygenase 1 JBrowse link 8 75,093,618 75,100,593 RGD:6480464
G Nfe2l2 nuclear factor, erythroid derived 2, like 2 JBrowse link 2 75,675,513 75,704,663 RGD:6480464
G Nqo1 NAD(P)H dehydrogenase, quinone 1 JBrowse link 8 107,388,225 107,403,205 RGD:6480464
G Pcna proliferating cell nuclear antigen JBrowse link 2 132,249,286 132,253,180 RGD:6480464
G Pparg peroxisome proliferator activated receptor gamma JBrowse link 6 115,360,879 115,490,404 RGD:6480464
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link 1 150,100,031 150,108,234 RGD:6480464
G Ugt1a1 UDP glucuronosyltransferase 1 family, polypeptide A1 JBrowse link 1 88,211,959 88,220,002 RGD:6480464
delta-tocopherol term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Casp3 caspase 3 JBrowse link 8 46,617,291 46,639,698 RGD:6480464
G Crabp2 cellular retinoic acid binding protein II JBrowse link 3 87,948,693 87,953,372 RGD:6480464
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 JBrowse link 9 57,687,928 57,703,824 RGD:6480464
G Esr1 estrogen receptor 1 (alpha) JBrowse link 10 4,611,989 5,005,633 RGD:6480464
G Esr2 estrogen receptor 2 (beta) JBrowse link 12 76,120,419 76,177,259 RGD:6480464
G Gclm glutamate-cysteine ligase, modifier subunit JBrowse link 3 122,245,487 122,267,215 RGD:6480464
G Gstm1 glutathione S-transferase, mu 1 JBrowse link 3 108,012,250 108,017,973 RGD:6480464
G Hmox1 heme oxygenase 1 JBrowse link 8 75,093,618 75,100,593 RGD:6480464
G Nfe2l2 nuclear factor, erythroid derived 2, like 2 JBrowse link 2 75,675,513 75,704,663 RGD:6480464
G Nqo1 NAD(P)H dehydrogenase, quinone 1 JBrowse link 8 107,388,225 107,403,205 RGD:6480464
G Pcna proliferating cell nuclear antigen JBrowse link 2 132,249,286 132,253,180 RGD:6480464
G Pparg peroxisome proliferator activated receptor gamma JBrowse link 6 115,360,879 115,490,404 RGD:6480464
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link 1 150,100,031 150,108,234 RGD:6480464
G Ugt1a1 UDP glucuronosyltransferase 1 family, polypeptide A1 JBrowse link 1 88,211,959 88,220,002 RGD:6480464
gamma-tocopherol term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcc1 ATP-binding cassette, sub-family C (CFTR/MRP), member 1 JBrowse link 16 14,361,453 14,474,878 RGD:6480464
G Alb albumin JBrowse link 5 90,460,870 90,476,602 RGD:6480464
G App amyloid beta (A4) precursor protein JBrowse link 16 84,952,666 85,175,255 RGD:6480464
G Ar androgen receptor JBrowse link X 98,148,757 98,323,218 RGD:6480464
G Arf3 ADP-ribosylation factor 3 JBrowse link 15 98,737,624 98,763,118 RGD:6480464
G Aspm abnormal spindle microtubule assembly JBrowse link 1 139,454,188 139,494,088 RGD:6480464
G Atp1a2 ATPase, Na+/K+ transporting, alpha 2 polypeptide JBrowse link 1 172,271,709 172,298,064 RGD:6480464
G Atp1b2 ATPase, Na+/K+ transporting, beta 2 polypeptide JBrowse link 11 69,599,728 69,605,978 RGD:6480464
G Aurka aurora kinase A JBrowse link 2 172,356,190 172,370,886 RGD:6480464
G Bax BCL2-associated X protein JBrowse link 7 45,461,695 45,466,903 RGD:6480464
G Bcl2 B cell leukemia/lymphoma 2 JBrowse link 1 106,538,176 106,714,290 RGD:6480464
G Bcl2l1 BCL2-like 1 JBrowse link 2 152,758,732 152,833,803 RGD:6480464
G Birc5 baculoviral IAP repeat-containing 5 JBrowse link 11 117,849,237 117,855,743 RGD:6480464
G Camk2g calcium/calmodulin-dependent protein kinase II gamma JBrowse link 14 20,734,873 20,794,157 RGD:6480464
G Casp3 caspase 3 JBrowse link 8 46,617,291 46,639,698 RGD:6480464
G Casp9 caspase 9 JBrowse link 4 141,793,612 141,815,978 RGD:6480464
G Cat catalase JBrowse link 2 103,453,904 103,485,153 RGD:6480464
G Ccnb2 cyclin B2 JBrowse link 9 70,407,689 70,421,554 RGD:6480464
G Ccnd1 cyclin D1 JBrowse link 7 144,929,931 144,939,831 RGD:6480464
G Ccnd3 cyclin D3 JBrowse link 17 47,505,051 47,599,689 RGD:6480464
G Ccne1 cyclin E1 JBrowse link 7 38,097,984 38,107,490 RGD:6480464
G Cdc6 cell division cycle 6 JBrowse link 11 98,907,709 98,923,942 RGD:6480464
G Cdk1 cyclin-dependent kinase 1 JBrowse link 10 69,335,146 69,352,912 RGD:6480464
G Cdk2 cyclin-dependent kinase 2 JBrowse link 10 128,697,938 128,705,051 RGD:6480464
G Cdk4 cyclin-dependent kinase 4 JBrowse link 10 127,063,535 127,067,288 RGD:6480464
G Cdk5r1 cyclin-dependent kinase 5, regulatory subunit 1 (p35) JBrowse link 11 80,477,023 80,481,184 RGD:6480464
G Cdkn1a cyclin-dependent kinase inhibitor 1A (P21) JBrowse link 17 29,090,979 29,100,722 RGD:6480464
G Cdkn1b cyclin-dependent kinase inhibitor 1B JBrowse link 6 134,920,401 134,925,525 RGD:6480464
G Cdkn2a cyclin dependent kinase inhibitor 2A JBrowse link 4 89,274,473 89,294,619 RGD:6480464
G Clec4e C-type lectin domain family 4, member e JBrowse link 6 123,281,789 123,289,871 RGD:6480464
G Cplx1 complexin 1 JBrowse link 5 108,518,554 108,550,027 RGD:6480464
G Cplx2 complexin 2 JBrowse link 13 54,301,964 54,383,923 RGD:6480464
G Crabp2 cellular retinoic acid binding protein II JBrowse link 3 87,948,693 87,953,372 RGD:6480464
G Crp C-reactive protein, pentraxin-related JBrowse link 1 172,698,056 172,699,966 RGD:6480464
G Csf1r colony stimulating factor 1 receptor JBrowse link 18 61,105,572 61,131,139 RGD:6480464
G Csrp2 cysteine and glycine-rich protein 2 JBrowse link 10 110,920,176 110,939,514 RGD:6480464
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 JBrowse link 9 57,687,928 57,703,824 RGD:6480464
G Dnajc5 DnaJ heat shock protein family (Hsp40) member C5 JBrowse link 2 181,518,858 181,552,886 RGD:6480464
G E2f1 E2F transcription factor 1 JBrowse link 2 154,559,400 154,569,892 RGD:6480464
G Egr1 early growth response 1 JBrowse link 18 34,861,207 34,864,956 RGD:6480464
G Esr1 estrogen receptor 1 (alpha) JBrowse link 10 4,611,989 5,005,633 RGD:6480464
G Esr2 estrogen receptor 2 (beta) JBrowse link 12 76,120,419 76,177,259 RGD:6480464
G Fcer1a Fc receptor, IgE, high affinity I, alpha polypeptide JBrowse link 1 173,221,269 173,227,232 RGD:6480464
G Fes feline sarcoma oncogene JBrowse link 7 80,377,758 80,387,954 RGD:6480464
G Fgf1 fibroblast growth factor 1 JBrowse link 18 38,838,672 38,929,470 RGD:6480464
G Fgf2 fibroblast growth factor 2 JBrowse link 3 37,348,477 37,410,106 RGD:6480464
G Fgfr1 fibroblast growth factor receptor 1 JBrowse link 8 25,518,759 25,575,718 RGD:6480464
G Fkbp9 FK506 binding protein 9 JBrowse link 6 56,832,059 56,879,360 RGD:6480464
G Fos FBJ osteosarcoma oncogene JBrowse link 12 85,473,890 85,477,274 RGD:6480464
G Fpr-rs4 formyl peptide receptor, related sequence 4 JBrowse link 17 18,021,733 18,022,704 RGD:6480464
G Gclm glutamate-cysteine ligase, modifier subunit JBrowse link 3 122,245,487 122,267,215 RGD:6480464
G Gria2 glutamate receptor, ionotropic, AMPA2 (alpha 2) JBrowse link 3 80,681,450 80,804,227 RGD:6480464
G Grin1 glutamate receptor, ionotropic, NMDA1 (zeta 1) JBrowse link 2 25,291,177 25,319,187 RGD:6480464
G Gstm1 glutathione S-transferase, mu 1 JBrowse link 3 108,012,250 108,017,973 RGD:6480464
G Gsto1 glutathione S-transferase omega 1 JBrowse link 19 47,854,973 47,864,790 RGD:6480464
G Haspin histone H3 associated protein kinase JBrowse link 11 73,135,484 73,138,294 RGD:6480464
G Hmox1 heme oxygenase 1 JBrowse link 8 75,093,618 75,100,593 RGD:6480464
G Jun jun proto-oncogene JBrowse link 4 95,049,036 95,052,222 RGD:6480464
G Kif20a kinesin family member 20A JBrowse link 18 34,624,624 34,633,277 RGD:6480464
G Kif4 kinesin family member 4 JBrowse link X 100,626,065 100,727,271 RGD:6480464
G Mcl1 myeloid cell leukemia sequence 1 JBrowse link 3 95,656,944 95,663,179 RGD:6480464
G Muc5ac mucin 5, subtypes A and C, tracheobronchial/gastric JBrowse link 7 141,788,958 141,819,227 RGD:6480464
G Myc myelocytomatosis oncogene JBrowse link 15 61,985,341 61,990,361 RGD:6480464
G Napb N-ethylmaleimide sensitive fusion protein attachment protein beta JBrowse link 2 148,693,985 148,732,425 RGD:6480464
G Nfe2l2 nuclear factor, erythroid derived 2, like 2 JBrowse link 2 75,675,513 75,704,663 RGD:6480464
G Nqo1 NAD(P)H dehydrogenase, quinone 1 JBrowse link 8 107,388,225 107,403,205 RGD:6480464
G Nsf N-ethylmaleimide sensitive fusion protein JBrowse link 11 103,821,782 103,954,056 RGD:6480464
G Pcna proliferating cell nuclear antigen JBrowse link 2 132,249,286 132,253,180 RGD:6480464
G Pparg peroxisome proliferator activated receptor gamma JBrowse link 6 115,360,879 115,490,404 RGD:6480464
G Ppp3ca protein phosphatase 3, catalytic subunit, alpha isoform JBrowse link 3 136,669,714 136,937,727 RGD:6480464
G Prtn3 proteinase 3 JBrowse link 10 79,879,667 79,883,174 RGD:6480464
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link 1 150,100,031 150,108,234 RGD:6480464
G Ptpro protein tyrosine phosphatase, receptor type, O JBrowse link 6 137,252,299 137,464,634 RGD:6480464
G Rab11b RAB11B, member RAS oncogene family JBrowse link 17 33,742,484 33,760,486 RGD:6480464
G Rab3a RAB3A, member RAS oncogene family JBrowse link 8 70,754,703 70,758,608 RGD:6480464
G Rab6b RAB6B, member RAS oncogene family JBrowse link 9 103,111,667 103,185,276 RGD:6480464
G Rb1 RB transcriptional corepressor 1 JBrowse link 14 73,192,858 73,325,951 RGD:6480464
G Rrm1 ribonucleotide reductase M1 JBrowse link 7 102,441,695 102,469,771 RGD:6480464
G Rrm2 ribonucleotide reductase M2 JBrowse link 12 24,708,254 24,714,146 RGD:6480464
G Snca synuclein, alpha JBrowse link 6 60,731,573 60,829,855 RGD:6480464
G Sncb synuclein, beta JBrowse link 13 54,758,860 54,766,622 RGD:6480464
G Sod1 superoxide dismutase 1, soluble JBrowse link 16 90,220,762 90,226,333 RGD:6480464
G Stx1a syntaxin 1A (brain) JBrowse link 5 135,023,482 135,051,100 RGD:6480464
G Stxbp1 syntaxin binding protein 1 JBrowse link 2 32,787,607 32,847,237 RGD:6480464
G Sv2a synaptic vesicle glycoprotein 2 a JBrowse link 3 96,181,227 96,195,183 RGD:6480464
G Syn1 synapsin I JBrowse link X 20,860,511 20,920,918 RGD:6480464
G Syn2 synapsin II JBrowse link 6 115,134,902 115,282,626 RGD:6480464
G Syngr1 synaptogyrin 1 JBrowse link 15 80,091,334 80,119,501 RGD:6480464
G Syp synaptophysin JBrowse link X 7,638,580 7,653,256 RGD:6480464
G Syt11 synaptotagmin XI JBrowse link 3 88,744,699 88,775,159 RGD:6480464
G Syt13 synaptotagmin XIII JBrowse link 2 92,915,101 92,956,051 RGD:6480464
G Tnf tumor necrosis factor JBrowse link 17 35,199,367 35,202,007 RGD:6480464
G Tnfaip2 tumor necrosis factor, alpha-induced protein 2 JBrowse link 12 111,442,450 111,455,018 RGD:6480464
G Trp53 transformation related protein 53 JBrowse link 11 69,580,348 69,591,873 RGD:6480464
G Ttc3 tetratricopeptide repeat domain 3 JBrowse link 16 94,370,625 94,469,222 RGD:6480464
G Ugt1a1 UDP glucuronosyltransferase 1 family, polypeptide A1 JBrowse link 1 88,211,959 88,220,002 RGD:6480464
G Vamp1 vesicle-associated membrane protein 1 JBrowse link 6 125,215,581 125,222,306 RGD:6480464
G Vamp2 vesicle-associated membrane protein 2 JBrowse link 11 69,088,528 69,092,381 RGD:6480464
G Vdr vitamin D (1,25-dihydroxyvitamin D3) receptor JBrowse link 15 97,854,427 97,908,296 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 21322
    role 21309
      chemical role 20654
        antioxidant 14392
          vitamin E 1732
            tocopherol 226
              13'-carboxy-alpha-tocopherol 0
              2,5,7,8-tetramethyl-2-(4,8,12-trimethyltridecyl)-3,4-dihydro-2H-1-benzopyran-6-ol 0
              alpha-tocopherol + 158
              beta-tocopherol 13
              dehydro-gamma-tocopherol 0
              delta-tocopherol 14
              gamma-tocopherol + 99
Path 2
Term Annotations click to browse term
  CHEBI ontology 21322
    subatomic particle 21318
      composite particle 21318
        hadron 21318
          baryon 21318
            nucleon 21318
              atomic nucleus 21318
                atom 21318
                  main group element atom 21193
                    p-block element atom 21193
                      carbon group element atom 20991
                        carbon atom 20881
                          organic molecular entity 20881
                            organic molecule 20763
                              organic cyclic compound 20250
                                organic heterocyclic compound 19058
                                  oxacycle 17313
                                    benzopyran 9611
                                      1-benzopyran 9315
                                        chromanes 3938
                                          chromanol 1732
                                            chroman-6-ol 1732
                                              vitamin E 1732
                                                tocopherol 226
                                                  13'-carboxy-alpha-tocopherol 0
                                                  2,5,7,8-tetramethyl-2-(4,8,12-trimethyltridecyl)-3,4-dihydro-2H-1-benzopyran-6-ol 0
                                                  alpha-tocopherol + 158
                                                  beta-tocopherol 13
                                                  dehydro-gamma-tocopherol 0
                                                  delta-tocopherol 14
                                                  gamma-tocopherol + 99
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.