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ONTOLOGY REPORT - ANNOTATIONS


Term:glycodeoxycholic acid
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Accession:CHEBI:27471 term browser browse the term
Definition:A bile acid glycine conjugate of deoxycholic acid.
Synonyms:exact_synonym: N-(3alpha,12alpha-dihydroxy-5beta-cholan-24-oyl)glycine
 related_synonym: Formula=C26H43NO5;   GDCA;   Glycodeoxycholate;   InChI=1S/C26H43NO5/c1-15(4-9-23(30)27-14-24(31)32)19-7-8-20-18-6-5-16-12-17(28)10-11-25(16,2)21(18)13-22(29)26(19,20)3/h15-22,28-29H,4-14H2,1-3H3,(H,27,30)(H,31,32)/t15-,16-,17-,18+,19-,20+,21+,22+,25+,26-/m1/s1;   InChIKey=WVULKSPCQVQLCU-BUXLTGKBSA-N;   SMILES=C1[C@@]2([C@]3(C[C@@H]([C@]4([C@]([C@@]3(CC[C@@]2(C[C@@H](C1)O)[H])[H])(CC[C@@]4([C@@H](CCC(NCC(O)=O)=O)C)[H])[H])C)O)[H])C;   deoxycholic acid glycine conjugate;   deoxycholylglycine;   glycodesoxycholic acid
 alt_id: CHEBI:1686;   CHEBI:20208;   CHEBI:5465
 xref: Beilstein:2954947 "Beilstein";   CAS:360-65-6 "ChemIDplus";   HMDB:HMDB0000631;   KEGG:C05464;   LINCS:LSM-5760;   LIPID_MAPS_instance:LMST05030006 "LIPID MAPS"
 xref_mesh: MESH:D006002
 xref: MetaCyc:GLYCODEOXYCHOLIC_ACID;   PMID:22359652 "Europe PMC";   PMID:23892997 "Europe PMC";   PMID:659989 "Europe PMC";   Reaxys:2954947 "Reaxys";   Wikipedia:Glycodeoxycholic_acid
 cyclic_relationship: is_conjugate_acid_of CHEBI:82982


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glycodeoxycholic acid term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcc1 ATP binding cassette subfamily C member 1 JBrowse link 10 549,537 672,235 RGD:6480464
G Casp3 caspase 3 JBrowse link 16 48,845,011 48,863,249 RGD:6480464
G Myl9 myosin light chain 9 JBrowse link 3 152,857,573 152,863,961 RGD:6480464
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 JBrowse link 7 30,003,429 30,162,095 RGD:6480464
G Por cytochrome p450 oxidoreductase JBrowse link 12 23,998,411 24,017,063 RGD:6480464
G Ppp1r12a protein phosphatase 1, regulatory subunit 12A JBrowse link 7 51,404,971 51,515,382 RGD:6480464
G Rhoa ras homolog family member A JBrowse link 8 117,082,440 117,116,244 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19654
    role 19598
      biological role 19596
        molecular messenger 17921
          neurotransmitter 5823
            glycine 453
              glycine derivative 447
                bile acid glycine conjugate 34
                  glycodeoxycholic acid 7
                    7-oxoglycodeoxycholic acid 0
                    glycodeoxycholic acid 3-sulfate 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19654
    subatomic particle 19650
      composite particle 19650
        hadron 19650
          baryon 19650
            nucleon 19650
              atomic nucleus 19650
                atom 19650
                  main group element atom 19531
                    p-block element atom 19531
                      carbon group element atom 19413
                        carbon atom 19405
                          organic molecular entity 19405
                            organic molecule 19327
                              organic cyclic compound 19076
                                organic polycyclic compound 16018
                                  steroid 12762
                                    steroid fundamental parent 12385
                                      cholane 861
                                        cholanoid 861
                                          cholanic acids 861
                                            cholanic acid 861
                                              5beta-cholanic acid 861
                                                hydroxy-5beta-cholanic acid 861
                                                  dihydroxy-5beta-cholanic acid 712
                                                    deoxycholic acid 159
                                                      glycodeoxycholic acid 7
                                                        7-oxoglycodeoxycholic acid 0
                                                        glycodeoxycholic acid 3-sulfate 0
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.