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ONTOLOGY REPORT - ANNOTATIONS


Term:lipid II
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Accession:CHEBI:27692 term browser browse the term
Definition:An undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl peptide in which the peptide element is L-alanyl-D-gamma-glutamyl-L-lysyl-D-alanyl-D-alanine.
Synonyms:exact_synonym: N-[(2R)-2-{[(2R,3R,4R,5S,6R)-3-acetamido-5-{[(2S,3R,4R,5S,6R)-3-acetamido-4,5-dihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yl]oxy}-2-({hydroxy[(hydroxy{[(2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-3,7,11,15,19,23,27,31,35,39,43-undecamethyltetratetraconta-2,6,10,14,18,22,26,30,34,38,42-undecaen-1-yl]oxy}phosphoryl)oxy]phosphoryl}oxy)-6-(hydroxymethyl)tetrahydro-2H-pyran-4-yl]oxy}propanoyl]-L-alanyl-D-gamma-glutamyl-L-lysyl-D-alanyl-D-alanine
 related_synonym: Formula=C94H156N8O26P2;   GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)-diphosphoundecaprenol;   InChI=1S/C94H156N8O26P2/c1-59(2)31-21-32-60(3)33-22-34-61(4)35-23-36-62(5)37-24-38-63(6)39-25-40-64(7)41-26-42-65(8)43-27-44-66(9)45-28-46-67(10)47-29-48-68(11)49-30-50-69(12)54-56-122-129(118,119)128-130(120,121)127-94-82(100-75(18)106)86(85(79(58-104)125-94)126-93-81(99-74(17)105)84(109)83(108)78(57-103)124-93)123-73(16)89(112)96-71(14)88(111)102-77(92(116)117)52-53-80(107)101-76(51-19-20-55-95)90(113)97-70(13)87(110)98-72(15)91(114)115/h31,33,35,37,39,41,43,45,47,49,54,70-73,76-79,81-86,93-94,103-104,108-109H,19-30,32,34,36,38,40,42,44,46,48,50-53,55-58,95H2,1-18H3,(H,96,112)(H,97,113)(H,98,110)(H,99,105)(H,100,106)(H,101,107)(H,102,111)(H,114,115)(H,116,117)(H,118,119)(H,120,121)/b60-33+,61-35+,62-37-,63-39-,64-41-,65-43-,66-45-,67-47-,68-49-,69-54-/t70-,71+,72-,73-,76+,77-,78-,79-,81-,82-,83-,84-,85-,86-,93+,94-/m1/s1;   InChIKey=ULXTYUPMJXVUHQ-OVTFQNCVSA-N;   SMILES=C[C@@H](NC(=O)[C@@H](C)NC(=O)[C@H](CCCCN)NC(=O)CC[C@@H](NC(=O)[C@H](C)NC(=O)[C@@H](C)O[C@@H]1[C@@H](NC(C)=O)[C@H](O[C@H](CO)[C@H]1O[C@@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@H]1NC(C)=O)OP(O)(=O)OP(O)(=O)OC\\C=C(\\C)CC\\C=C(\\C)CC\\C=C(\\C)CC\\C=C(\\C)CC\\C=C(\\C)CC\\C=C(\\C)CC\\C=C(\\C)CC\\C=C(\\C)CC\\C=C(/C)CC\\C=C(/C)CCC=C(C)C)C(O)=O)C(O)=O;   Undecaprenyl-diphospho-N-acetylmuramoyl-(N-acetylglucosamine)-L-alanyl-gamma-D-glutamyl-L-lysyl-D-alanyl-D-alanine;   undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-D-gamma-glutamyl-L-lysyl-D-alanyl-D-alanine
 alt_id: CHEBI:13343;   CHEBI:27203;   CHEBI:63162;   CHEBI:9873
 xref: Beilstein:9039417 "Beilstein";   KEGG:C05893;   KEGG:G10553;   PMID:11716719 "SUBMITTER";   PMID:16531990 "SUBMITTER"
 cyclic_relationship: is_conjugate_acid_of CHEBI:60033


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  CHEBI ontology 824
    chemical entity 824
      group 785
        organic group 348
          amino-acid residue 36
            peptide 36
              glycopeptide 0
                undecaprenyldiphospho-N-acetylmuramoyl peptide 0
                  lipid II 0
Path 2
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  CHEBI ontology 824
    subatomic particle 808
      composite particle 808
        hadron 808
          baryon 808
            nucleon 808
              atomic nucleus 808
                atom 808
                  main group element atom 796
                    p-block element atom 793
                      chalcogen 767
                        oxygen atom 714
                          oxygen molecular entity 714
                            hydroxides 643
                              oxoacid 275
                                pnictogen oxoacid 28
                                  phosphorus oxoacid 23
                                    phosphoric acids 23
                                      phosphoric acid 23
                                        phosphoric acid derivative 23
                                          phosphate 23
                                            organic phosphate 23
                                              phospholipid 2
                                                isoprenoid phosphate 0
                                                  prenol phosphate 0
                                                    polyprenol phosphate 0
                                                      polyprenyl phospho carbohydrate 0
                                                        polyprenyl phospho oligosaccharide 0
                                                          undecaprenyldiphospho-N-acetylmuramoyl peptide 0
                                                            lipid II 0
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.