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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:D-erythrose
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Accession:CHEBI:27904 term browser browse the term
Definition:The D-enantiomer of erythrose.
Synonyms:exact_synonym: (2R,3R)-2,3,4-trihydroxybutanal;   D-erythro-tetrose
 related_synonym: Formula=C4H8O4;   InChI=1S/C4H8O4/c5-1-3(7)4(8)2-6/h1,3-4,6-8H,2H2/t3-,4+/m0/s1;   InChIKey=YTBSYETUWUMLBZ-IUYQGCFVSA-N;   SMILES=OC[C@@H](O)[C@@H](O)C=O
 alt_id: CHEBI:20926;   CHEBI:4113
 xref: Beilstein:5805561;   CAS:583-50-6;   HMDB:HMDB0002649;   KEGG:C01796;   KNApSAcK:C00007412;   PMID:16901854;   PMID:22841585;   PMID:23501397;   PMID:6229527;   PMID:6238947;   Reaxys:5805561;   Wikipedia:Erythrose
 cyclic_relationship: is_enantiomer_of CHEBI:21288


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D-erythrose 4-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Idh2 isocitrate dehydrogenase (NADP(+)) 2 multiple interactions
increases abundance
ISO Triazines inhibits the reaction [IDH2 protein mutant form results in increased abundance of erythrose 4-phosphate] CTD PMID:27469509 NCBI chr 1:141,874,354...141,893,674
Ensembl chr 1:141,866,283...141,893,705
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Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19816
    role 19764
      biological role 19764
        biochemical role 19313
          metabolite 19294
            eukaryotic metabolite 18943
              plant metabolite 17424
                D-erythrose 1
                  D-erythrose 4-phosphate 1
                  D-erythrose 4-phosphate(2-) 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19816
    subatomic particle 19814
      composite particle 19814
        hadron 19814
          baryon 19814
            nucleon 19814
              atomic nucleus 19814
                atom 19814
                  main group element atom 19702
                    p-block element atom 19702
                      carbon group element atom 19608
                        carbon atom 19597
                          organic molecular entity 19597
                            heteroorganic entity 19184
                              organochalcogen compound 18894
                                organooxygen compound 18816
                                  carbohydrates and carbohydrate derivatives 12191
                                    carbohydrate 12191
                                      monosaccharide 4035
                                        aldose 2548
                                          aldotetrose 1
                                            erythroses 1
                                              erythrose 1
                                                D-erythrose 1
                                                  D-erythrose 4-phosphate 1
                                                  D-erythrose 4-phosphate(2-) 0
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