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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:gentamycin C
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Accession:CHEBI:28417 term browser browse the term
Synonyms:related_synonym: Formula=C19H37N5O7R2;   Gentamicin C
 alt_id: CHEBI:14294;   CHEBI:24208;   CHEBI:5308
 xref: CAS:11097-82-8;   KEGG:C01918
 xref_mesh: MESH:C100093
 cyclic_relationship: is_conjugate_base_of CHEBI:75616


show annotations for term's descendants           Sort by:
 
gentamycin C term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc2a1 solute carrier family 2 (facilitated glucose transporter), member 1 increases expression EXP gentamicin C results in increased expression of SLC2A1 mRNA CTD PMID:12927799 NCBI chr 4:119,108,745...119,137,330
Ensembl chr 4:119,108,711...119,137,983
JBrowse link
G Slc5a1 solute carrier family 5 (sodium/glucose cotransporter), member 1 decreases expression
multiple interactions
EXP gentamicin C results in decreased expression of SLC5A1 mRNA; gentamicin C results in decreased expression of SLC5A1 protein
[gentamicin C results in decreased expression of SLC5A1 protein] which results in decreased uptake of Glucose
CTD PMID:12927799 NCBI chr 5:33,104,219...33,162,699
Ensembl chr 5:33,104,219...33,162,870
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 21450
    role 21426
      biological role 21424
        antimicrobial agent 18257
          carbohydrate-containing antibiotic 2545
            aminoglycoside antibiotic 2526
              gentamycin 2347
                gentamycin C 2
                  gentamycin C1 0
                  gentamycin C1a 0
                  gentamycin C2 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 21450
    subatomic particle 21434
      composite particle 21434
        hadron 21434
          baryon 21434
            nucleon 21434
              atomic nucleus 21434
                atom 21434
                  main group element atom 21329
                    p-block element atom 21329
                      carbon group element atom 21100
                        carbon atom 20999
                          organic molecular entity 20999
                            heteroorganic entity 20696
                              organochalcogen compound 19902
                                organooxygen compound 19828
                                  carbohydrates and carbohydrate derivatives 12753
                                    carbohydrate 12753
                                      carbohydrate derivative 12378
                                        glycosyl compound 11083
                                          glycoside 9383
                                            aminoglycoside 8547
                                              aminoglycoside antibiotic 2526
                                                gentamycin 2347
                                                  gentamycin C 2
                                                    gentamycin C1 0
                                                    gentamycin C1a 0
                                                    gentamycin C2 0
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