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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:gentamycin C
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Accession:CHEBI:28417 term browser browse the term
Synonyms:related_synonym: Formula=C19H37N5O7R2;   Gentamicin C
 alt_id: CHEBI:14294;   CHEBI:24208;   CHEBI:5308
 xref: CAS:11097-82-8;   KEGG:C01918
 xref_mesh: MESH:C100093
 cyclic_relationship: is_conjugate_base_of CHEBI:75616


show annotations for term's descendants           Sort by:
 
gentamycin C term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc2a1 solute carrier family 2 member 1 increases expression ISO gentamicin C results in increased expression of SLC2A1 mRNA CTD PMID:12927799 NCBI chr 5:138,154,677...138,182,897
Ensembl chr 5:138,154,673...138,182,897
JBrowse link
G Slc5a1 solute carrier family 5 member 1 decreases expression
multiple interactions
ISO gentamicin C results in decreased expression of SLC5A1 mRNA; gentamicin C results in decreased expression of SLC5A1 protein
[gentamicin C results in decreased expression of SLC5A1 protein] which results in decreased uptake of Glucose
CTD PMID:12927799 NCBI chr14:82,910,448...82,975,303
Ensembl chr14:82,909,981...82,975,263
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19792
    role 19738
      biological role 19737
        antimicrobial agent 17329
          carbohydrate-containing antibiotic 2556
            aminoglycoside antibiotic 2538
              gentamycin 2362
                gentamycin C 2
                  gentamycin C1 0
                  gentamycin C1a 0
                  gentamycin C2 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19792
    subatomic particle 19788
      composite particle 19788
        hadron 19788
          baryon 19788
            nucleon 19788
              atomic nucleus 19788
                atom 19788
                  main group element atom 19675
                    p-block element atom 19675
                      carbon group element atom 19571
                        carbon atom 19560
                          organic molecular entity 19560
                            heteroorganic entity 19165
                              organochalcogen compound 18873
                                organooxygen compound 18795
                                  carbohydrates and carbohydrate derivatives 12193
                                    carbohydrate 12193
                                      carbohydrate derivative 11814
                                        glycosyl compound 10854
                                          glycoside 9213
                                            aminoglycoside 8424
                                              aminoglycoside antibiotic 2538
                                                gentamycin 2362
                                                  gentamycin C 2
                                                    gentamycin C1 0
                                                    gentamycin C1a 0
                                                    gentamycin C2 0
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