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ONTOLOGY REPORT - ANNOTATIONS


Term:ganglioside
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Accession:CHEBI:28892 term browser browse the term
Definition:A molecule composed of a glycosphingolipid (ceramide and oligosaccharide) with one or more sialic acids linked on the sugar chain.
Synonyms:exact_synonym: sialoglycosphingolipids
 related_synonym: gangliosides
 alt_id: CHEBI:26669;   CHEBI:36525;   CHEBI:5274
 xref: KEGG:C01808;   LIPID_MAPS_class:LMSP0601 "LIPID MAPS";   PMID:16158191 "Europe PMC";   PMID:2088646 "Europe PMC";   Wikipedia:Ganglioside


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ganglioside GM1 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cd14 CD14 molecule JBrowse link 18 29,560,341 29,562,290 RGD:6480464
G Cdkn1a cyclin-dependent kinase inhibitor 1A JBrowse link 20 6,348,422 6,358,864 RGD:6480464
G Cdkn1b cyclin-dependent kinase inhibitor 1B JBrowse link 4 168,689,043 168,694,159 RGD:6480464
G Npc1 NPC intracellular cholesterol transporter 1 JBrowse link 18 3,616,878 3,662,656 RGD:6480464
G Ntrk1 neurotrophic receptor tyrosine kinase 1 JBrowse link 2 187,143,568 187,160,373 RGD:6480464
G Pld1 phospholipase D1 JBrowse link 2 113,651,967 113,849,403 RGD:6480464
G Pld2 phospholipase D2 JBrowse link 10 57,161,921 57,181,148 RGD:6480464
G Slc18a2 solute carrier family 18 member A2 JBrowse link 1 280,397,831 280,457,968 RGD:6480464
G Slc6a3 solute carrier family 6 member 3 JBrowse link 1 32,323,011 32,363,983 RGD:6480464
G Th tyrosine hydroxylase JBrowse link 1 216,073,034 216,080,287 RGD:6480464
G Tlr4 toll-like receptor 4 JBrowse link 5 82,587,424 82,601,056 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19728
    chemical entity 19726
      atom 19724
        nonmetal atom 19597
          carbon atom 19494
            organic molecular entity 19494
              lipid 16956
                sphingolipid 174
                  ceramide 96
                    ganglioside 11
                      Ganglioside GD3 (d18:1/16:0) 0
                      alpha-Neu5Ac-(2->3)-beta-D-Gal-(1->4)-beta-D-GlcNAc-(1->3)-[alpha-D-GalNAc-(1->3)-[alpha-L-Fuc-(1->2)]-beta-D-Gal-(1->4)-[alpha-L-Fuc-(1->3)]-beta-D-GlcNAc-(1->3)-beta-D-Gal-(1->4)-beta-D-GlcNAc-(1->6)]-beta-D-Gal-(1->4)-beta-D-GlcNAc-(1->3)-beta-D-Gal-(1->4)-beta-D-Glc-(1<->1')-Cer 0
                      sialodecaosylceramide + 0
                      sialodiosylceramide + 0
                      sialoheptaosylceramide + 0
                      sialohexaosylceramide + 0
                      sialomonoglycosylceramide + 0
                      sialononaosylceramide + 0
                      sialooctaosylceramide + 0
                      sialopentaosylceramide + 0
                      sialotetraosylceramide + 11
                      sialotriaosylceramide + 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19728
    subatomic particle 19724
      composite particle 19724
        hadron 19724
          baryon 19724
            nucleon 19724
              atomic nucleus 19724
                atom 19724
                  main group element atom 19610
                    p-block element atom 19610
                      carbon group element atom 19501
                        carbon atom 19494
                          organic molecular entity 19494
                            organic group 18413
                              organic divalent group 18404
                                organodiyl group 18404
                                  carbonyl group 18293
                                    carbonyl compound 18293
                                      carboxylic acid 17960
                                        carboacyl group 17072
                                          univalent carboacyl group 17072
                                            carbamoyl group 16801
                                              carboxamide 16801
                                                ceramide 96
                                                  ganglioside 11
                                                    Ganglioside GD3 (d18:1/16:0) 0
                                                    alpha-Neu5Ac-(2->3)-beta-D-Gal-(1->4)-beta-D-GlcNAc-(1->3)-[alpha-D-GalNAc-(1->3)-[alpha-L-Fuc-(1->2)]-beta-D-Gal-(1->4)-[alpha-L-Fuc-(1->3)]-beta-D-GlcNAc-(1->3)-beta-D-Gal-(1->4)-beta-D-GlcNAc-(1->6)]-beta-D-Gal-(1->4)-beta-D-GlcNAc-(1->3)-beta-D-Gal-(1->4)-beta-D-Glc-(1<->1')-Cer 0
                                                    sialodecaosylceramide + 0
                                                    sialodiosylceramide + 0
                                                    sialoheptaosylceramide + 0
                                                    sialohexaosylceramide + 0
                                                    sialomonoglycosylceramide + 0
                                                    sialononaosylceramide + 0
                                                    sialooctaosylceramide + 0
                                                    sialopentaosylceramide + 0
                                                    sialotetraosylceramide + 11
                                                    sialotriaosylceramide + 0
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.