Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:malonic acid
go back to main search page
Accession:CHEBI:30794 term browser browse the term
Definition:An alpha,omega-dicarboxylic acid in which the two carboxy groups are separated by a single methylene group.
Synonyms:related_synonym: Formula=C3H4O4;   H2malo;   HOOC-CH2-COOH;   InChI=1S/C3H4O4/c4-2(5)1-3(6)7/h1H2,(H,4,5)(H,6,7);   InChIKey=OFOBLEOULBTSOW-UHFFFAOYSA-N;   Propanedioic acid;   SMILES=OC(=O)CC(O)=O
 alt_id: CHEBI:25132;   CHEBI:44060;   CHEBI:6660
 xref: Beilstein:1751370 "Beilstein";   CAS:141-82-2 "ChemIDplus";   CAS:141-82-2 "KEGG COMPOUND";   CAS:141-82-2 "NIST Chemistry WebBook";   DrugBank:DB02175;   Gmelin:2550 "Gmelin";   HMDB:HMDB0000691;   KEGG:C00383;   KNApSAcK:C00001193;   LIPID_MAPS_instance:LMFA01170041 "LIPID MAPS"
 xref_mesh: MESH:C030290
 xref: MetaCyc:MALONATE;   PDBeChem:MLA;   PMID:22770225 "Europe PMC";   Reaxys:1751370 "Reaxys";   Wikipedia:Malonic_acid
 cyclic_relationship: is_conjugate_acid_of CHEBI:30795


show annotations for term's descendants       view all columns           Sort by:
 
malonic acid term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bcl2 BCL2, apoptosis regulator JBrowse link 13 26,605,426 26,769,374 RGD:6480464
G Casp3 caspase 3 JBrowse link 16 48,845,011 48,863,249 RGD:6480464
G Casp9 caspase 9 JBrowse link 5 160,356,211 160,373,774 RGD:6480464
G Hif1a hypoxia inducible factor 1 subunit alpha JBrowse link 6 96,810,868 96,856,303 RGD:6480464
G Lepr leptin receptor JBrowse link 5 120,503,475 120,682,281 RGD:6480464
G Ppargc1a PPARG coactivator 1 alpha JBrowse link 14 63,095,291 63,190,688 RGD:6480464
G Slc25a10 solute carrier family 25 member 10 JBrowse link 10 109,665,682 109,674,782 RGD:6480464
aminomalonic acid term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fmr1 FMRP translational regulator 1 JBrowse link X 154,684,924 154,722,369 RGD:6480464
elesclomol term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bag3 BAG cochaperone 3 JBrowse link 1 199,941,258 199,965,191 RGD:6480464
G Chordc1 cysteine and histidine rich domain containing 1 JBrowse link 8 17,421,552 17,445,513 RGD:6480464
G Clk1 CDC-like kinase 1 JBrowse link 9 65,296,777 65,308,017 RGD:6480464
G Cryab crystallin, alpha B JBrowse link 8 55,178,543 55,182,546 RGD:6480464
G Dnajb1 DnaJ heat shock protein family (Hsp40) member B1 JBrowse link 19 24,747,178 24,750,919 RGD:6480464
G Dnajb4 DnaJ heat shock protein family (Hsp40) member B4 JBrowse link 2 257,394,692 257,425,344 RGD:6480464
G Dnajb9 DnaJ heat shock protein family (Hsp40) member B9 JBrowse link 6 64,165,913 64,170,122 RGD:6480464
G Ftl1 ferritin light chain 1 JBrowse link 1 101,448,190 101,450,034 RGD:6480464
G Gclm glutamate cysteine ligase, modifier subunit JBrowse link 2 225,827,504 225,847,876 RGD:6480464
G Gla galactosidase, alpha JBrowse link X 105,405,915 105,417,331 RGD:6480464
G Herpud1 homocysteine inducible ER protein with ubiquitin like domain 1 JBrowse link 19 11,046,905 11,057,440 RGD:6480464
G Hmox1 heme oxygenase 1 JBrowse link 19 14,508,634 14,515,455 RGD:6480464
G Hspa1a heat shock protein family A (Hsp70) member 1A JBrowse link 20 4,875,834 4,881,751 RGD:6480464
G Hspa1b heat shock protein family A (Hsp70) member 1B JBrowse link 20 4,877,638 4,880,112 RGD:6480464
G Hsph1 heat shock protein family H (Hsp110) member 1 JBrowse link 12 6,322,685 6,341,898 RGD:6480464
G Ier5 immediate early response 5 JBrowse link 13 72,742,210 72,744,302 RGD:6480464
G Ifrd1 interferon-related developmental regulator 1 JBrowse link 6 60,132,025 60,151,354 RGD:6480464
G Oser1 oxidative stress responsive serine-rich 1 JBrowse link 3 159,784,131 159,802,923 RGD:6480464
G Pmaip1 phorbol-12-myristate-13-acetate-induced protein 1 JBrowse link 18 62,159,128 62,179,635 RGD:6480464
G Ppp1r15a protein phosphatase 1, regulatory subunit 15A JBrowse link 1 101,511,899 101,515,043 RGD:6480464
G Psmc1 proteasome 26S subunit, ATPase 1 JBrowse link 6 124,123,283 124,135,644 RGD:6480464
G Psmc4 proteasome 26S subunit, ATPase 4 JBrowse link 1 84,978,220 84,986,536 RGD:6480464
G Psmc6 proteasome 26S subunit, ATPase 6 JBrowse link 15 19,667,453 19,688,916 RGD:6480464
G Psmd1 proteasome 26S subunit, non-ATPase 1 JBrowse link 9 93,080,618 93,155,033 RGD:6480464
G Psmd12 proteasome 26S subunit, non-ATPase 12 JBrowse link 10 95,706,808 95,725,452 RGD:6480464
G Psmd2 proteasome 26S subunit, non-ATPase 2 JBrowse link 11 83,934,098 83,944,725 RGD:6480464
G Psme4 proteasome activator subunit 4 JBrowse link 14 115,166,165 115,269,041 RGD:6480464
G Rb1cc1 RB1-inducible coiled-coil 1 JBrowse link 5 13,033,918 13,097,369 RGD:6480464
G Sat1 spermidine/spermine N1-acetyl transferase 1 JBrowse link X 43,626,480 43,629,767 RGD:6480464
G Sde2 SDE2 telomere maintenance homolog JBrowse link 13 99,136,921 99,153,187 RGD:6480464
G Slc19a2 solute carrier family 19 member 2 JBrowse link 13 82,552,586 82,566,586 RGD:6480464
G Slc30a1 solute carrier family 30 member 1 JBrowse link 13 110,677,810 110,681,683 RGD:6480464
G Slc7a11 solute carrier family 7 member 11 JBrowse link 2 139,453,774 139,528,479 RGD:6480464
G Trib3 tribbles pseudokinase 3 JBrowse link 3 147,814,056 147,819,650 RGD:6480464
G Txnrd1 thioredoxin reductase 1 JBrowse link 7 26,946,124 26,984,400 RGD:6480464
G Ufm1 ubiquitin-fold modifier 1 JBrowse link 2 143,096,268 143,104,412 RGD:6480464
G Uspl1 ubiquitin specific peptidase like 1 JBrowse link 12 6,930,018 6,957,027 RGD:6480464
G Yrdc yrdC N(6)-threonylcarbamoyltransferase domain containing JBrowse link 5 142,845,265 142,850,110 RGD:6480464
G Zc3hav1 zinc finger CCCH-type containing, antiviral 1 JBrowse link 4 66,012,111 66,062,160 RGD:6480464
G Zfand2a zinc finger AN1-type containing 2A JBrowse link 12 17,252,093 17,263,477 RGD:6480464
G Zfp394 zinc finger protein 394 JBrowse link 12 11,179,323 11,187,362 RGD:6480464
ethylmalonic acid term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aif1 allograft inflammatory factor 1 JBrowse link 20 5,161,350 5,167,176 RGD:6480464
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:6480464
G Il6 interleukin 6 JBrowse link 4 3,043,231 3,047,807 RGD:6480464
G Lepr leptin receptor JBrowse link 5 120,503,475 120,682,281 RGD:6480464
G Nos2 nitric oxide synthase 2 JBrowse link 10 66,188,290 66,221,621 RGD:6480464
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:6480464
isoprothiolane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Esr1 estrogen receptor 1 JBrowse link 1 41,192,029 41,594,799 RGD:6480464
G Nr1i2 nuclear receptor subfamily 1, group I, member 2 JBrowse link 11 65,022,100 65,058,546 RGD:6480464
G Pgr progesterone receptor JBrowse link 8 7,128,656 7,187,796 RGD:6480464
G Tff1 trefoil factor 1 JBrowse link 20 9,892,124 9,895,984 RGD:6480464
methylmalonic acid term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aif1 allograft inflammatory factor 1 JBrowse link 20 5,161,350 5,167,176 RGD:6480464
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:6480464
G Il6 interleukin 6 JBrowse link 4 3,043,231 3,047,807 RGD:6480464
G Lepr leptin receptor JBrowse link 5 120,503,475 120,682,281 RGD:6480464
G Nos2 nitric oxide synthase 2 JBrowse link 10 66,188,290 66,221,621 RGD:6480464
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19654
    role 19598
      biological role 19596
        biochemical role 19125
          metabolite 19093
            eukaryotic metabolite 18735
              animal metabolite 18475
                mammalian metabolite 18457
                  human metabolite 18120
                    malonic acid 58
                      3-(benzyloxy)-3-oxopropanoic acid 0
                      3-oxo-3-ureidopropanoic acid 0
                      N-malonyltryptophan 0
                      O-malonyl-D-carnitine 0
                      O-malonyl-L-carnitine 0
                      O-malonylcarnitine 0
                      S-malonyl-4'-phosphopantetheine 0
                      aminomalonic acid 1
                      bumadizone 0
                      carboxyacetyl group + 0
                      elesclomol + 41
                      ethylmalonic acid + 6
                      heptylmalonic acid 0
                      hydroxymalonic acid 0
                      isoprothiolane + 4
                      malonamide + 0
                      malonate ester + 4
                      malonyl group 0
                      malonyl-CoA methyl ester 0
                      methylmalonic acid + 6
                      oxomalonic acid 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19654
    subatomic particle 19650
      composite particle 19650
        hadron 19650
          baryon 19650
            nucleon 19650
              atomic nucleus 19650
                atom 19650
                  main group element atom 19531
                    p-block element atom 19531
                      carbon group element atom 19413
                        carbon atom 19405
                          organic molecular entity 19405
                            organic group 18331
                              organic divalent group 18321
                                organodiyl group 18321
                                  carbonyl group 18209
                                    carbonyl compound 18209
                                      dicarboxylic acids and O-substituted derivatives 10162
                                        dicarboxylic acid 10155
                                          alpha,omega-dicarboxylic acid 2740
                                            malonic acid 58
                                              3-(benzyloxy)-3-oxopropanoic acid 0
                                              3-oxo-3-ureidopropanoic acid 0
                                              N-malonyltryptophan 0
                                              O-malonyl-D-carnitine 0
                                              O-malonyl-L-carnitine 0
                                              O-malonylcarnitine 0
                                              S-malonyl-4'-phosphopantetheine 0
                                              aminomalonic acid 1
                                              bumadizone 0
                                              carboxyacetyl group + 0
                                              elesclomol + 41
                                              ethylmalonic acid + 6
                                              heptylmalonic acid 0
                                              hydroxymalonic acid 0
                                              isoprothiolane + 4
                                              malonamide + 0
                                              malonate ester + 4
                                              malonyl group 0
                                              malonyl-CoA methyl ester 0
                                              methylmalonic acid + 6
                                              oxomalonic acid 0
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.