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ONTOLOGY REPORT - ANNOTATIONS


Term:(S)-AMPA
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Accession:CHEBI:34018 term browser browse the term
Definition:A non-proteinogenic alpha-amino acid that has formula C7H10N2O4.
Synonyms:related_synonym: (S)-2-Amino-3-(3-hydroxy-5-methyl-4-isoxazolyl)propionic acid;   Formula=C7H10N2O4;   InChI=1S/C7H10N2O4/c1-3-4(6(10)9-13-3)2-5(8)7(11)12/h5H,2,8H2,1H3,(H,9,10)(H,11,12);   InChIKey=UUDAMDVQRQNNHZ-UHFFFAOYSA-N;   SMILES=Cc1onc(O)c1CC(N)C(O)=O;   alpha-Amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid
 xref: CAS:77521-29-0 "KEGG COMPOUND";   KEGG:C13672
 xref_mesh: MESH:D018350


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(S)-AMPA term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adora2a adenosine A2a receptor JBrowse link 20 14,265,251 14,282,873 RGD:6480464
G Adora2b adenosine A2B receptor JBrowse link 10 48,569,563 48,586,366 RGD:6480464
G Bdnf brain-derived neurotrophic factor JBrowse link 3 100,768,637 100,819,216 RGD:6480464
G Casp3 caspase 3 JBrowse link 16 48,845,011 48,863,249 RGD:6480464
G Creb1 cAMP responsive element binding protein 1 JBrowse link 9 71,229,753 71,298,994 RGD:6480464
G Gdnf glial cell derived neurotrophic factor JBrowse link 2 56,884,181 56,912,964 RGD:6480464
G Gria1 glutamate ionotropic receptor AMPA type subunit 1 JBrowse link 10 42,441,723 42,760,200 RGD:6480464
G Gria2 glutamate ionotropic receptor AMPA type subunit 2 JBrowse link 2 179,584,302 179,704,629 RGD:6480464
G Hmox1 heme oxygenase 1 JBrowse link 19 14,508,634 14,515,455 RGD:6480464
G Hnrnpab heterogeneous nuclear ribonucleoprotein A/B JBrowse link 10 34,955,713 34,961,662 RGD:6480464
G Klc2 kinesin light chain 2 JBrowse link 1 220,492,174 220,502,397 RGD:6480464
G Slc7a11 solute carrier family 7 member 11 JBrowse link 2 139,453,774 139,528,479 RGD:6480464
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19748
    role 19695
      application 19350
        refrigerant 17102
          ammonia 16700
            organic amino compound 16699
              amino acid 12448
                alpha-amino acid 7653
                  non-proteinogenic alpha-amino acid 1513
                    (S)-AMPA 13
Path 2
Term Annotations click to browse term
  CHEBI ontology 19748
    subatomic particle 19744
      composite particle 19744
        hadron 19744
          baryon 19744
            nucleon 19744
              atomic nucleus 19744
                atom 19744
                  main group element atom 19628
                    p-block element atom 19628
                      carbon group element atom 19522
                        carbon atom 19516
                          organic molecular entity 19516
                            organic group 18426
                              organic divalent group 18418
                                organodiyl group 18418
                                  carbonyl group 18306
                                    carbonyl compound 18306
                                      carboxylic acid 17973
                                        amino acid 12448
                                          alpha-amino acid 7653
                                            non-proteinogenic alpha-amino acid 1513
                                              (S)-AMPA 13
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.