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ONTOLOGY REPORT - ANNOTATIONS


Term:(24S)-24-hydroxycholesterol
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Accession:CHEBI:34310 term browser browse the term
Definition:A 24-hydroxycholesterol that has S configuration at position 24.
Synonyms:related_synonym: (24S)-cholest-5-ene-3beta,24-diol;   24-Hydroxycholesterol;   24S-hydroxy-cholesterol;   24S-hydroxycholesterol;   Cerebrosterol;   Cholest-5-ene-3,24-diol;   Formula=C27H46O2;   InChI=1S/C27H46O2/c1-17(2)25(29)11-6-18(3)22-9-10-23-21-8-7-19-16-20(28)12-14-26(19,4)24(21)13-15-27(22,23)5/h7,17-18,20-25,28-29H,6,8-16H2,1-5H3/t18-,20+,21+,22-,23+,24+,25+,26+,27-/m1/s1;   InChIKey=IOWMKBFJCNLRTC-XWXSNNQWSA-N;   SMILES=[H][C@@]1(CC[C@@]2([H])[C@]3([H])CC=C4C[C@@H](O)CC[C@]4(C)[C@@]3([H])CC[C@]12C)[C@H](C)CC[C@H](O)C(C)C;   cholest-5-en-3beta,24S-diol
 xref: Beilstein:3218472 "Beilstein";   CAS:474-73-7 "ChemIDplus";   CAS:474-73-7 "KEGG COMPOUND";   KEGG:C13550;   LIPID_MAPS_instance:LMST01010019 "LIPID MAPS"
 xref_mesh: MESH:C044563


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(24S)-24-hydroxycholesterol term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abca1 ATP binding cassette subfamily A member 1 JBrowse link 5 69,857,717 69,983,042 RGD:6480464
G Abcg1 ATP binding cassette subfamily G member 1 JBrowse link 20 9,743,269 9,842,735 RGD:6480464
G App amyloid beta precursor protein JBrowse link 11 24,425,013 24,641,872 RGD:6480464
G Ccl2 C-C motif chemokine ligand 2 JBrowse link 10 69,412,065 69,413,863 RGD:6480464
G Cd36 CD36 molecule JBrowse link 4 14,150,309 14,191,498 RGD:6480464
G Cyp27a1 cytochrome P450, family 27, subfamily a, polypeptide 1 JBrowse link 9 81,968,285 81,998,213 RGD:6480464
G Cyp39a1 cytochrome P450, family 39, subfamily a, polypeptide 1 JBrowse link 9 19,804,079 19,880,346 RGD:6480464
G Cyp46a1 cytochrome P450, family 46, subfamily a, polypeptide 1 JBrowse link 6 132,242,328 132,273,788 RGD:6480464
G Cyp7a1 cytochrome P450 family 7 subfamily A member 1 JBrowse link 5 19,358,734 19,368,431 RGD:6480464
G Esr1 estrogen receptor 1 JBrowse link 1 41,192,029 41,594,799 RGD:6480464
G Esr2 estrogen receptor 2 JBrowse link 6 99,163,953 99,214,711 RGD:6480464
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase JBrowse link 2 27,480,224 27,500,654 RGD:6480464
G Itgb1 integrin subunit beta 1 JBrowse link 19 61,677,512 61,725,537 RGD:6480464
G Mmp9 matrix metallopeptidase 9 JBrowse link 3 161,413,410 161,421,473 RGD:6480464
G Nr1h3 nuclear receptor subfamily 1, group H, member 3 JBrowse link 3 80,004,130 80,014,197 RGD:6480464
G Ptges prostaglandin E synthase JBrowse link 3 9,727,408 9,738,752 RGD:6480464
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link 13 67,351,230 67,356,920 RGD:6480464
G Th tyrosine hydroxylase JBrowse link 1 216,073,034 216,080,287 RGD:6480464
G Tlr4 toll-like receptor 4 JBrowse link 5 82,587,424 82,601,056 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19716
    role 19663
      biological role 19661
        biochemical role 19179
          metabolite 19151
            eukaryotic metabolite 18770
              algal metabolite 13312
                cholesterol 312
                  24-hydroxycholesterol 19
                    (24S)-24-hydroxycholesterol 19
                      (24S)-24-hydroxycholesterol ester + 0
                      (24S)-hydroxycholesterol 24-sulfate 0
                      (24S)-hydroxycholesterol 3,24-disulfate 0
                      (24S)-hydroxycholesterol 3-sulfate 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19716
    subatomic particle 19712
      composite particle 19712
        hadron 19712
          baryon 19712
            nucleon 19712
              atomic nucleus 19712
                atom 19712
                  main group element atom 19598
                    p-block element atom 19598
                      carbon group element atom 19486
                        carbon atom 19480
                          organic molecular entity 19480
                            organic molecule 19402
                              organic cyclic compound 19158
                                organic polycyclic compound 16027
                                  steroid 12770
                                    hydroxy steroid 12362
                                      3-hydroxy steroid 9989
                                        3beta-hydroxy steroid 1979
                                          3beta-hydroxy-Delta(5)-steroid 1838
                                            cholesterol 312
                                              oxysterol 91
                                                24-hydroxycholesterol 19
                                                  (24S)-24-hydroxycholesterol 19
                                                    (24S)-24-hydroxycholesterol ester + 0
                                                    (24S)-hydroxycholesterol 24-sulfate 0
                                                    (24S)-hydroxycholesterol 3,24-disulfate 0
                                                    (24S)-hydroxycholesterol 3-sulfate 0
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.