Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:8-epi-prostaglandin F2alpha
go back to main search page
Accession:CHEBI:34505 term browser browse the term
Definition:An isoprostane that is prostaglandin F2alpha having inverted stereochemistry at the 8-position.
Synonyms:related_synonym: (5Z,13E,15S)-9alpha,11alpha,15-trihydroxy-8beta-prosta-5,13-dien-1-oic acid;   8-Epiprostaglandin F2alpha;   8-Iso-PGF2a;   8-Iso-PGF2alpha;   8-IsoP;   8-Isoprostaglandin F2alpha;   8-Isoprostane;   8-epi-PGF2alpha;   8-iso-PGF2alpha-III;   9,11,15-Trihydroxy-prosta-5,13-dien-1-oic acid;   Formula=C20H34O5;   InChI=1S/C20H34O5/c1-2-3-6-9-15(21)12-13-17-16(18(22)14-19(17)23)10-7-4-5-8-11-20(24)25/h4,7,12-13,15-19,21-23H,2-3,5-6,8-11,14H2,1H3,(H,24,25)/b7-4-,13-12+/t15-,16-,17+,18-,19+/m0/s1;   InChIKey=PXGPLTODNUVGFL-NAPLMKITSA-N;   SMILES=C1[C@@H]([C@H]([C@H]([C@@H]1O)/C=C/[C@H](CCCCC)O)C/C=C\\CCCC(O)=O)O
 xref: CAS:27415-26-5 "ChemIDplus";   HMDB:HMDB0005083;   KEGG:C13809;   LIPID_MAPS_instance:LMFA03110001 "LIPID MAPS"
 xref_mesh: MESH:C075750
 xref: PMID:10711349 "Europe PMC";   PMID:11290373 "Europe PMC";   PMID:11309241 "Europe PMC";   PMID:11442801 "Europe PMC";   PMID:12023538 "Europe PMC";   PMID:12626646 "Europe PMC";   PMID:12869634 "Europe PMC";   PMID:14504139 "Europe PMC";   PMID:14718263 "Europe PMC";   PMID:15363966 "Europe PMC";   PMID:15528403 "Europe PMC";   PMID:18455148 "Europe PMC";   PMID:18544228 "Europe PMC";   PMID:19581065 "Europe PMC";   PMID:26279287 "Europe PMC";   PMID:26288351 "Europe PMC";   PMID:26919242 "Europe PMC";   PMID:27171014 "Europe PMC";   PMID:27256793 "Europe PMC";   PMID:27530350 "Europe PMC";   PMID:27660223 "Europe PMC";   PMID:27780952 "Europe PMC";   PMID:28031075 "Europe PMC";   PMID:28102831 "Europe PMC";   PMID:28385290 "Europe PMC";   PMID:9733362 "Europe PMC";   PMID:9853769 "Europe PMC";   Reaxys:7170215 "Reaxys"
 cyclic_relationship: is_conjugate_acid_of CHEBI:77768


show annotations for term's descendants       view all columns           Sort by:
 
8-epi-prostaglandin F2alpha term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apoe apolipoprotein E JBrowse link 1 80,612,894 80,616,820 RGD:6480464
G App amyloid beta precursor protein JBrowse link 11 24,425,013 24,641,872 RGD:6480464
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:6480464
G Pafah2 platelet-activating factor acetylhydrolase 2 JBrowse link 5 152,606,850 152,635,956 RGD:6480464
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link 13 67,351,230 67,356,920 RGD:6480464
G Tbxa2r thromboxane A2 receptor JBrowse link 7 11,253,153 11,259,233 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19716
    role 19663
      application 19308
        indicator 8524
          biomarker 6271
            8-epi-prostaglandin F2alpha 6
              1-palmitoyl-2-(8-epi-prostaglandin F2alpha)-sn-glycero-3-phosphocholine 0
              1-stearoyl-2-(8-epi-prostaglandin F2alpha)-sn-glycero-3-phosphocholine 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19716
    subatomic particle 19712
      composite particle 19712
        hadron 19712
          baryon 19712
            nucleon 19712
              atomic nucleus 19712
                atom 19712
                  main group element atom 19598
                    p-block element atom 19598
                      carbon group element atom 19486
                        carbon atom 19480
                          organic molecular entity 19480
                            organic group 18407
                              organic divalent group 18397
                                organodiyl group 18397
                                  carbonyl group 18285
                                    carbonyl compound 18285
                                      carboxylic acid 17940
                                        monocarboxylic acid 17260
                                          fatty acid 15814
                                            fatty acid derivative 1017
                                              icosanoid 451
                                                prostanoid 394
                                                  prostaglandin 389
                                                    prostaglandins F 97
                                                      prostaglandins Falpha 96
                                                        prostaglandin F2alpha 86
                                                          8-epi-prostaglandin F2alpha 6
                                                            1-palmitoyl-2-(8-epi-prostaglandin F2alpha)-sn-glycero-3-phosphocholine 0
                                                            1-stearoyl-2-(8-epi-prostaglandin F2alpha)-sn-glycero-3-phosphocholine 0
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.