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ONTOLOGY REPORT - ANNOTATIONS


Term:isoprene
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Accession:CHEBI:35194 term browser browse the term
Definition:A hemiterpene with the formula CH2=C(CH3)CH=CH2; the monomer of natural rubber and a common structure motif to the isoprenoids, a large class of other naturally occurring compounds.
Synonyms:related_synonym: 2-methyl-1,3-butadiene;   2-methylbuta-1,3-diene;   2-methylbutadiene;   2-methyldivinyl;   CH2=C(CH3)CH=CH2;   Formula=C5H8;   InChI=1S/C5H8/c1-4-5(2)3/h4H,1-2H2,3H3;   InChIKey=RRHGJUQNOFWUDK-UHFFFAOYSA-N;   Isopren;   SMILES=CC(=C)C=C;   beta-methylbivinyl;   isopentadiene;   isopreno;   isoterpene
 xref: Beilstein:969158 "Beilstein";   CAS:78-79-5 "ChemIDplus";   CAS:78-79-5 "KEGG COMPOUND";   CAS:78-79-5 "NIST Chemistry WebBook";   Gmelin:1768 "Gmelin";   KEGG:C16521
 xref_mesh: MESH:C005059
 xref: MetaCyc:CPD-9436;   PMID:17921528 "Europe PMC";   PMID:19011917 "Europe PMC";   PMID:8690002 "Europe PMC";   Reaxys:969158 "Reaxys";   Wikipedia:Isoprene


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isoprene term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccnd1 cyclin D1 JBrowse link 1 218,090,750 218,100,447 RGD:6480464
G Ccne1 cyclin E1 JBrowse link 1 94,485,830 94,495,112 RGD:6480464
G Cdh1 cadherin 1 JBrowse link 19 38,768,467 38,838,395 RGD:6480464
G Cdh2 cadherin 2 JBrowse link 18 8,146,971 8,366,037 RGD:6480464
G Cdkn1a cyclin-dependent kinase inhibitor 1A JBrowse link 20 6,348,422 6,358,864 RGD:6480464
G Cdkn1b cyclin-dependent kinase inhibitor 1B JBrowse link 4 168,689,043 168,694,159 RGD:6480464
G Hras HRas proto-oncogene, GTPase JBrowse link 1 214,178,404 214,181,841 RGD:6480464
G Kras KRAS proto-oncogene, GTPase JBrowse link 4 179,482,562 179,515,483 RGD:6480464
G Mapk1 mitogen activated protein kinase 1 JBrowse link 11 88,203,863 88,273,301 RGD:6480464
G Mapk3 mitogen activated protein kinase 3 JBrowse link 1 198,192,773 198,198,975 RGD:6480464
G Ocln occludin JBrowse link 2 30,527,327 30,577,218 RGD:6480464
G Snai2 snail family transcriptional repressor 2 JBrowse link 11 90,404,421 90,406,730 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19741
    chemical entity 19739
      molecular entity 19736
        polyatomic entity 19652
          molecule 19466
            organic molecule 19431
              volatile organic compound 13383
                isoprene 12
                  4-[(E)-\{amino[(3-methylbut-2-en-1-yl)amino]methylidene\}amino]butanoic acid 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19741
    subatomic particle 19737
      composite particle 19737
        hadron 19737
          baryon 19737
            nucleon 19737
              atomic nucleus 19737
                atom 19737
                  main group element atom 19622
                    main group molecular entity 19622
                      s-block molecular entity 19388
                        hydrogen molecular entity 19377
                          hydrides 18283
                            organic hydride 17547
                              organic fundamental parent 17547
                                hydrocarbon 16958
                                  olefin 7117
                                    acyclic olefin 7097
                                      alkadiene 2058
                                        isoprene 12
                                          4-[(E)-\{amino[(3-methylbut-2-en-1-yl)amino]methylidene\}amino]butanoic acid 0
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.