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ONTOLOGY REPORT - ANNOTATIONS


Term:indole
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Accession:CHEBI:35581 term browser browse the term
Definition:Either of two isomeric forms comprising a benzene ring fused to a pyrrole ring.
Synonyms:related_synonym: Formula=C8H7N
 xref: HMDB:HMDB0000738;   PMID:24563545 "Europe PMC";   PMID:24695245 "Europe PMC";   Wikipedia:Indole


show annotations for term's descendants       view all columns           Sort by:
 
1H-indole term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ahr aryl hydrocarbon receptor JBrowse link 6 54,963,990 55,001,806 RGD:6480464
G Arnt aryl hydrocarbon receptor nuclear translocator JBrowse link 2 196,594,178 196,651,486 RGD:6480464
G Epo erythropoietin JBrowse link 12 22,274,828 22,278,268 RGD:6480464
G Mc1r melanocortin 1 receptor JBrowse link 19 56,215,420 56,219,987 RGD:6480464
G Mc3r melanocortin 3 receptor JBrowse link 3 170,252,901 170,253,998 RGD:6480464
G Mc4r melanocortin 4 receptor JBrowse link 18 62,612,838 62,614,725 RGD:6480464
G Mc5r melanocortin 5 receptor JBrowse link 18 64,113,659 64,118,700 RGD:6480464
2-methyl-1H-indole term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 JBrowse link 8 62,472,087 62,478,122 RGD:6480464
G Cyp1a2 cytochrome P450, family 1, subfamily a, polypeptide 2 JBrowse link 8 62,451,360 62,458,244 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19654
    chemical entity 19652
      molecular entity 19649
        mancude ring 7834
          organic mancude parent 7834
            mancude organic heterocyclic parent 7834
              mancude organic heterobicyclic parent 5165
                indole 7
                  1H-indole + 7
                  3-geranyl-3-[(Z)-2-isocyanovinyl]-3H-indole 0
                  3H-indole + 0
                  indolyl group + 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19654
    subatomic particle 19650
      composite particle 19650
        hadron 19650
          baryon 19650
            nucleon 19650
              atomic nucleus 19650
                atom 19650
                  main group element atom 19531
                    p-block element atom 19531
                      carbon group element atom 19413
                        carbon atom 19405
                          organic molecular entity 19405
                            organic molecule 19327
                              organic cyclic compound 19076
                                organic heterocyclic compound 18151
                                  organic heteropolycyclic compound 17415
                                    organic heterobicyclic compound 15891
                                      benzopyrrole 5750
                                        indoles 5526
                                          indole 7
                                            1H-indole + 7
                                            3-geranyl-3-[(Z)-2-isocyanovinyl]-3H-indole 0
                                            3H-indole + 0
                                            indolyl group + 0
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.