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ONTOLOGY REPORT - ANNOTATIONS


Term:anthocyanin
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Accession:CHEBI:38697 term browser browse the term
Definition:Any flavonoid that is a glycoside derivative of anthocyanidin. Anthocyanins are water-souluble plant pigments that generally occur as acidic salts exhibiting bright colours.
Synonyms:related_synonym: anthocyanins
 alt_id: MESH:D000872
 xref_mesh: MESH:D000872


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anthocyanin term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acta2 actin, alpha 2, smooth muscle, aorta JBrowse link 19 34,240,336 34,255,585 RGD:6480464
G Ager advanced glycosylation end product-specific receptor JBrowse link 17 34,597,460 34,600,937 RGD:6480464
G Atm ataxia telangiectasia mutated JBrowse link 9 53,437,122 53,536,828 RGD:6480464
G B2m beta-2 microglobulin JBrowse link 2 122,147,687 122,153,082 RGD:6480464
G Bad BCL2-associated agonist of cell death JBrowse link 19 6,941,861 6,951,905 RGD:6480464
G Bak1 BCL2-antagonist/killer 1 JBrowse link 17 27,019,812 27,028,627 RGD:6480464
G Bax BCL2-associated X protein JBrowse link 7 45,461,695 45,466,903 RGD:6480464
G Bcl2 B cell leukemia/lymphoma 2 JBrowse link 1 106,538,176 106,714,290 RGD:6480464
G Bcl2l1 BCL2-like 1 JBrowse link 2 152,758,732 152,833,803 RGD:6480464
G Car1 carbonic anhydrase 1 JBrowse link 3 14,766,214 14,808,365 RGD:6480464
G Car2 carbonic anhydrase 2 JBrowse link 3 14,886,269 14,900,770 RGD:6480464
G Casp1 caspase 1 JBrowse link 9 5,298,517 5,307,281 RGD:6480464
G Casp3 caspase 3 JBrowse link 8 46,617,291 46,639,698 RGD:6480464
G Casp8 caspase 8 JBrowse link 1 58,795,233 58,847,503 RGD:6480464
G Casp9 caspase 9 JBrowse link 4 141,793,612 141,815,978 RGD:6480464
G Cat catalase JBrowse link 2 103,453,904 103,485,153 RGD:6480464
G Ccl2 chemokine (C-C motif) ligand 2 JBrowse link 11 82,035,577 82,037,452 RGD:6480464
G Ccn2 cellular communication network factor 2 JBrowse link 10 24,595,442 24,598,683 RGD:6480464
G Ccnb1 cyclin B1 JBrowse link 13 100,778,739 100,786,486 RGD:6480464
G Cdc25c cell division cycle 25C JBrowse link 18 34,732,993 34,751,564 RGD:6480464
G Cdh1 cadherin 1 JBrowse link 8 106,603,350 106,670,247 RGD:6480464
G Cdk1 cyclin-dependent kinase 1 JBrowse link 10 69,335,146 69,352,912 RGD:6480464
G Cdkn1a cyclin-dependent kinase inhibitor 1A (P21) JBrowse link 17 29,090,979 29,100,722 RGD:6480464
G Cdkn1b cyclin-dependent kinase inhibitor 1B JBrowse link 6 134,920,401 134,925,525 RGD:6480464
G Chek1 checkpoint kinase 1 JBrowse link 9 36,708,482 36,726,658 RGD:6480464
G Chek2 checkpoint kinase 2 JBrowse link 5 110,839,800 110,874,140 RGD:6480464
G Cldn4 claudin 4 JBrowse link 5 134,945,123 134,946,934 RGD:6480464
G Col1a1 collagen, type I, alpha 1 JBrowse link 11 94,936,224 94,953,042 RGD:6480464
G Col3a1 collagen, type III, alpha 1 JBrowse link 1 45,311,538 45,349,706 RGD:6480464
G Ctsd cathepsin D JBrowse link 7 142,375,910 142,387,827 RGD:6480464
G Cxcl2 chemokine (C-X-C motif) ligand 2 JBrowse link 5 90,903,899 90,905,938 RGD:6480464
G Cyp2c52-ps cytochrome P450, family 2, subfamily c, polypeptide 52, pseudogene JBrowse link 19 38,976,662 39,003,627 RGD:6480464
G Cyp2e1 cytochrome P450, family 2, subfamily e, polypeptide 1 JBrowse link 7 140,763,819 140,774,990 RGD:6480464
G Fadd Fas (TNFRSF6)-associated via death domain JBrowse link 7 144,578,323 144,582,441 RGD:6480464
G Fas Fas (TNF receptor superfamily member 6) JBrowse link 19 34,290,647 34,327,775 RGD:6480464
G Fasl Fas ligand (TNF superfamily, member 6) JBrowse link 1 161,780,691 161,788,495 RGD:6480464
G Gsr glutathione reductase JBrowse link 8 33,653,238 33,698,162 RGD:6480464
G Gusb glucuronidase, beta JBrowse link 5 129,989,011 130,003,049 RGD:6480464
G H2ax H2A.X variant histone JBrowse link 9 44,334,715 44,336,077 RGD:6480464
G Havcr1 hepatitis A virus cellular receptor 1 JBrowse link 11 46,739,822 46,779,578 RGD:6480464
G Ikbkb inhibitor of kappaB kinase beta JBrowse link 8 22,659,205 22,706,589 RGD:6480464
G Il10 interleukin 10 JBrowse link 1 131,019,845 131,024,970 RGD:6480464
G Il1b interleukin 1 beta JBrowse link 2 129,364,569 129,371,164 RGD:6480464
G Lcn2 lipocalin 2 JBrowse link 2 32,384,637 32,387,739 RGD:6480464
G Mmp9 matrix metallopeptidase 9 JBrowse link 2 164,940,326 164,955,850 RGD:6480464
G Mpo myeloperoxidase JBrowse link 11 87,793,784 87,804,412 RGD:6480464
G Nfkbia nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, alpha JBrowse link 12 55,489,409 55,492,647 RGD:6480464
G Nlrp3 NLR family, pyrin domain containing 3 JBrowse link 11 59,541,569 59,566,955 RGD:6480464
G Nos2 nitric oxide synthase 2, inducible JBrowse link 11 78,920,787 78,960,226 RGD:6480464
G Parp1 poly (ADP-ribose) polymerase family, member 1 JBrowse link 1 180,568,891 180,600,999 RGD:6480464
G Pcna proliferating cell nuclear antigen JBrowse link 2 132,249,286 132,253,180 RGD:6480464
G Pde5a phosphodiesterase 5A, cGMP-specific JBrowse link 3 122,729,158 122,859,374 RGD:6480464
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 JBrowse link 13 101,680,761 101,768,217 RGD:6480464
G Pla2g2a phospholipase A2, group IIA (platelets, synovial fluid) JBrowse link 4 138,831,857 138,835,189 RGD:6480464
G Plcd4 phospholipase C, delta 4 JBrowse link 1 74,541,975 74,565,977 RGD:6480464
G Por P450 (cytochrome) oxidoreductase JBrowse link 5 135,670,040 135,735,326 RGD:6480464
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link 1 150,100,031 150,108,234 RGD:6480464
G Pycard PYD and CARD domain containing JBrowse link 7 127,991,373 127,993,867 RGD:6480464
G Rela v-rel reticuloendotheliosis viral oncogene homolog A (avian) JBrowse link 19 5,637,442 5,648,134 RGD:6480464
G Smad2 SMAD family member 2 JBrowse link 18 76,241,090 76,311,748 RGD:6480464
G Snca synuclein, alpha JBrowse link 6 60,731,573 60,829,855 RGD:6480464
G Tgfb1 transforming growth factor, beta 1 JBrowse link 7 25,687,002 25,705,077 RGD:6480464
G Tgfbr1 transforming growth factor, beta receptor I JBrowse link 4 47,353,222 47,414,926 RGD:6480464
G Timp1 tissue inhibitor of metalloproteinase 1 JBrowse link X 20,870,166 20,874,737 RGD:6480464
G Tjp1 tight junction protein 1 JBrowse link 7 65,296,165 65,527,850 RGD:6480464
G Tnf tumor necrosis factor JBrowse link 17 35,199,367 35,202,007 RGD:6480464
G Txnip thioredoxin interacting protein JBrowse link 3 96,557,957 96,561,857 RGD:6480464
G Vim vimentin JBrowse link 2 13,574,311 13,582,826 RGD:6480464
G Xdh xanthine dehydrogenase JBrowse link 17 73,883,895 73,950,397 RGD:6480464
pelargonidin 3-O-beta-D-glucoside chloride term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Car1 carbonic anhydrase 1 JBrowse link 3 14,766,214 14,808,365 RGD:6480464
G Car2 carbonic anhydrase 2 JBrowse link 3 14,886,269 14,900,770 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 21258
    chemical entity 21256
      molecular entity 21248
        ion 16470
          organic ion 8253
            organic cation 7239
              anthocyanin 69
                anthocyanin chlorides + 2
Path 2
Term Annotations click to browse term
  CHEBI ontology 21258
    subatomic particle 21254
      composite particle 21254
        hadron 21254
          baryon 21254
            nucleon 21254
              atomic nucleus 21254
                atom 21254
                  main group element atom 21120
                    p-block element atom 21120
                      carbon group element atom 20892
                        carbon atom 20783
                          organic molecular entity 20783
                            organic molecule 20666
                              organic cyclic compound 20121
                                organic heterocyclic compound 18981
                                  oxacycle 17220
                                    benzopyran 9592
                                      1-benzopyran 9298
                                        chromenes 910
                                          chromene 142
                                            2H-chromene 142
                                              chromenyliums 142
                                                chromenylium 142
                                                  flavylium 142
                                                    anthocyanidin cation 142
                                                      anthocyanin cation 103
                                                        anthocyanin 69
                                                          anthocyanin chlorides + 2
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.