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Accession:CHEBI:45487 term browser browse the term
Definition:A retinal in which the double bond alpha- to the aldehyde group has cis configuration, whilst the remaining acyclic double bonds have trans configuration.
Synonyms:related_synonym: (13cis)-retinal;   (2Z,4E,6E,8E)-3,7-dimethyl-9-(2,6,6-trimethylcyclohex-1-en-1-yl)nona-2,4,6,8-tetraenal;   13-cis-retinaldehyde;   Formula=C20H28O;   InChI=1S/C20H28O/c1-16(8-6-9-17(2)13-15-21)11-12-19-18(3)10-7-14-20(19,4)5/h6,8-9,11-13,15H,7,10,14H2,1-5H3/b9-6+,12-11+,16-8+,17-13-;   InChIKey=NCYCYZXNIZJOKI-HWCYFHEPSA-N;   RETINAL;   SMILES=[H]C(=O)\\C=C(C)/C=C/C=C(C)/C=C/C1=C(C)CCCC1(C)C
 xref: Beilstein:1914182 "Beilstein";   CAS:472-86-6 "ChemIDplus";   LIPID_MAPS_instance:LMPR01090018 "LIPID MAPS"
 xref_mesh: MESH:C031338
 xref: MetaCyc:CPD-13525

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13-cis-retinal term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nr1i2 nuclear receptor subfamily 1, group I, member 2 JBrowse link 11 65,022,100 65,058,546 RGD:6480464
G Rxra retinoid X receptor alpha JBrowse link 3 6,272,560 6,295,354 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19716
    role 19663
      application 19308
        solvent 16081
          formic acid 7759
            formyl group 7725
              aldehyde 7725
                retinals 39
                  retinal 39
                    13-cis-retinal 2
Path 2
Term Annotations click to browse term
  CHEBI ontology 19716
    subatomic particle 19712
      composite particle 19712
        hadron 19712
          baryon 19712
            nucleon 19712
              atomic nucleus 19712
                atom 19712
                  main group element atom 19598
                    p-block element atom 19598
                      carbon group element atom 19486
                        carbon atom 19480
                          organic molecular entity 19480
                            organic group 18407
                              organic divalent group 18397
                                organodiyl group 18397
                                  carbonyl group 18285
                                    carbonyl compound 18285
                                      carboxylic acid 17940
                                        carboacyl group 16948
                                          univalent carboacyl group 16948
                                            formyl group 7725
                                              aldehyde 7725
                                                alpha,beta-unsaturated aldehyde 1293
                                                  enal 1293
                                                    retinal 39
                                                      13-cis-retinal 2
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.