Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:4-oxopentanoic acid
go back to main search page
Accession:CHEBI:45630 term browser browse the term
Definition:An oxopentanoic acid with the oxo group in the 4-position.
Synonyms:related_synonym: 3-acetylpropionic acid;   3-ketobutane-1-carboxylic acid;   4-ketovaleric acid;   4-oxovaleric acid;   Formula=C5H8O3;   InChI=1S/C5H8O3/c1-4(6)2-3-5(7)8/h2-3H2,1H3,(H,7,8);   InChIKey=JOOXCMJARBKPKM-UHFFFAOYSA-N;   LAEVULINIC ACID;   LEVA;   Laevulinsaeure;   Levulinsaeure;   SMILES=CC(=O)CCC(O)=O;   beta-acetylpropionic acid;   gamma-ketovaleric acid;   levulic acid;   levulinic acid
 alt_id: CHEBI:39149;   CHEBI:45628
 xref: Beilstein:506796 "Beilstein";   CAS:123-76-2 "ChemIDplus";   CAS:123-76-2 "NIST Chemistry WebBook";   DrugBank:DB02239;   Gmelin:164703 "Gmelin";   HMDB:HMDB0000720;   LIPID_MAPS_instance:LMFA01060006 "LIPID MAPS";   PDBeChem:SHF;   PMID:13215009 "Europe PMC";   PMID:16662002 "Europe PMC";   PMID:19246769 "Europe PMC";   PMID:23627123 "Europe PMC";   Reaxys:506796 "Reaxys";   Wikipedia:Levulinic_acid
 cyclic_relationship: is_conjugate_acid_of CHEBI:39150


show annotations for term's descendants       view all columns           Sort by:
 
5-aminolevulinic acid term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Alad aminolevulinate dehydratase JBrowse link 5 78,368,867 78,379,206 RGD:6480464
G Alas1 5'-aminolevulinate synthase 1 JBrowse link 8 114,927,704 114,941,038 RGD:6480464
G Bax BCL2 associated X, apoptosis regulator JBrowse link 1 101,451,801 101,457,207 RGD:6480464
G Bcl2 BCL2, apoptosis regulator JBrowse link 13 26,605,426 26,769,374 RGD:6480464
G Casp3 caspase 3 JBrowse link 16 48,845,011 48,863,249 RGD:6480464
G Casp8 caspase 8 JBrowse link 9 65,614,142 65,662,624 RGD:6480464
G Casp9 caspase 9 JBrowse link 5 160,356,211 160,373,774 RGD:6480464
G Cyp2a3 cytochrome P450, family 2, subfamily a, polypeptide 3 JBrowse link 1 83,653,248 83,662,118 RGD:6480464
G Fadd Fas associated via death domain JBrowse link 1 217,746,176 217,748,581 RGD:6480464
G Fech ferrochelatase JBrowse link 18 59,941,992 59,975,192 RGD:6480464
G Hmox1 heme oxygenase 1 JBrowse link 19 14,508,634 14,515,455 RGD:6480464
G Mag myelin-associated glycoprotein JBrowse link 1 89,345,325 89,360,905 RGD:6480464
G Mapk1 mitogen activated protein kinase 1 JBrowse link 11 88,203,863 88,273,301 RGD:6480464
G Mapk3 mitogen activated protein kinase 3 JBrowse link 1 198,192,773 198,198,975 RGD:6480464
G Mmp1 matrix metallopeptidase 1 JBrowse link 8 5,703,206 5,723,593 RGD:6480464
G Mmp2 matrix metallopeptidase 2 JBrowse link 19 15,542,771 15,570,589 RGD:6480464
G Mmp3 matrix metallopeptidase 3 JBrowse link 8 5,676,608 5,698,579 RGD:6480464
G Mpz myelin protein zero JBrowse link 13 89,524,204 89,530,070 RGD:6480464
G Ndufb8 NADH:ubiquinone oxidoreductase subunit B8 JBrowse link 1 264,298,671 264,303,712 RGD:6480464
G Nfe2l2 nuclear factor, erythroid 2-like 2 JBrowse link 3 62,497,568 62,525,146 RGD:6480464
G Parp1 poly (ADP-ribose) polymerase 1 JBrowse link 13 98,857,255 98,889,444 RGD:6480464
G Pmp22 peripheral myelin protein 22 JBrowse link 10 49,538,588 49,568,583 RGD:6480464
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 JBrowse link 2 54,857,688 54,893,404 RGD:6480464
G Rela RELA proto-oncogene, NF-kB subunit JBrowse link 1 220,992,770 221,003,249 RGD:6480464
G Tp53 tumor protein p53 JBrowse link 10 56,186,299 56,198,449 RGD:6480464
G Urod uroporphyrinogen decarboxylase JBrowse link 5 135,855,429 135,859,515 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19716
    role 19663
      biological role 19661
        biochemical role 19179
          metabolite 19151
            eukaryotic metabolite 18770
              plant metabolite 17103
                4-oxopentanoic acid 26
                  5-aminolevulinic acid + 26
Path 2
Term Annotations click to browse term
  CHEBI ontology 19716
    subatomic particle 19712
      composite particle 19712
        hadron 19712
          baryon 19712
            nucleon 19712
              atomic nucleus 19712
                atom 19712
                  main group element atom 19598
                    p-block element atom 19598
                      carbon group element atom 19486
                        carbon atom 19480
                          organic molecular entity 19480
                            organic group 18407
                              organic divalent group 18397
                                organodiyl group 18397
                                  carbonyl group 18285
                                    carbonyl compound 18285
                                      carboxylic acid 17940
                                        monocarboxylic acid 17260
                                          fatty acid 15814
                                            saturated fatty acid 15781
                                              straight-chain saturated fatty acid 15178
                                                valeric acid 14344
                                                  oxopentanoic acid 26
                                                    4-oxopentanoic acid 26
                                                      5-aminolevulinic acid + 26
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.