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ONTOLOGY REPORT - ANNOTATIONS


Term:trans-resveratrol
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Accession:CHEBI:45713 term browser browse the term
Definition:A resveratrol in which the double bond has E configuration.
Synonyms:exact_synonym: 5-[(1E)-2-(4-hydroxyphenyl)ethenyl]benzene-1,3-diol
 related_synonym: (E)-5-(2-(4-hydroxyphenyl)ethenyl)-1,3-benzenediol;   (E)-resveratrol;   3,4',5-stilbenetriol;   3,4',5-trihydroxy-trans-stilbene;   3,4',5-trihydroxystilbene;   5-[(E)-2-(4-hydroxyphenyl)vinyl]benzene-1,3-diol;   Formula=C14H12O3;   InChI=1S/C14H12O3/c15-12-5-3-10(4-6-12)1-2-11-7-13(16)9-14(17)8-11/h1-9,15-17H/b2-1+;   InChIKey=LUKBXSAWLPMMSZ-OWOJBTEDSA-N;   RESVERATROL;   SMILES=Oc1ccc(cc1)\\C=C\\c1cc(O)cc(O)c1
 alt_id: CHEBI:36000;   CHEBI:45712
 xref: Beilstein:1912434 "Beilstein";   CAS:501-36-0 "ChemIDplus";   CAS:501-36-0 "KEGG COMPOUND";   CAS:501-36-0 "NIST Chemistry WebBook";   DrugBank:DB02709;   HMDB:HMDB0003747;   KEGG:C03582;   KNApSAcK:C00002903;   LIPID_MAPS_instance:LMPK13090005 "LIPID MAPS"
 xref_mesh: MESH:C059514
 xref: MetaCyc:CPD-83;   PDBeChem:STL;   PMID:11408943 "Europe PMC";   PMID:11414688 "Europe PMC";   PMID:15492766 "Europe PMC";   PMID:18261608 "Europe PMC";   PMID:18616940 "Europe PMC";   PMID:18789672 "Europe PMC";   PMID:19046449 "Europe PMC";   PMID:19084917 "Europe PMC";   PMID:24345046 "Europe PMC";   PMID:24467639 "Europe PMC";   PMID:25172731 "Europe PMC";   PMID:25308653 "Europe PMC";   PMID:25624257 "Europe PMC";   PMID:25643926 "Europe PMC";   PMID:25684680 "Europe PMC";   PMID:25704710 "Europe PMC";   PMID:25724133 "Europe PMC";   PMID:25762527 "Europe PMC";   PMID:25814186 "Europe PMC";   PMID:25841977 "Europe PMC";   PMID:25937213 "Europe PMC";   PMID:28094526 "Europe PMC";   Reaxys:1912434 "Reaxys";   Wikipedia:Resveratrol


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(-)-trans-epsilon-viniferin term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcc1 ATP binding cassette subfamily C member 1 JBrowse link 10 549,537 672,235 RGD:6480464
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 JBrowse link 8 62,472,087 62,478,122 RGD:6480464
G Cyp1a2 cytochrome P450, family 1, subfamily a, polypeptide 2 JBrowse link 8 62,451,360 62,458,244 RGD:6480464
G Cyp1b1 cytochrome P450, family 1, subfamily b, polypeptide 1 JBrowse link 6 2,308,179 2,316,739 RGD:6480464
G Cyp2b3 cytochrome P450, family 2, subfamily b, polypeptide 3 JBrowse link 1 83,163,103 83,236,615 RGD:6480464
G Cyp2e1 cytochrome P450, family 2, subfamily e, polypeptide 1 JBrowse link 1 213,511,892 213,522,195 RGD:6480464
G Ldlr low density lipoprotein receptor JBrowse link 8 22,750,425 22,773,305 RGD:6480464
trans-piceid term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcc2 ATP binding cassette subfamily C member 2 JBrowse link 1 263,554,426 263,612,556 RGD:6480464
G Abcg2 ATP binding cassette subfamily G member 2 JBrowse link 4 88,765,441 88,890,268 RGD:6480464
G Agt angiotensinogen JBrowse link 19 57,321,594 57,333,460 RGD:6480464
G Ahr aryl hydrocarbon receptor JBrowse link 6 54,963,990 55,001,806 RGD:6480464
G Arnt aryl hydrocarbon receptor nuclear translocator JBrowse link 2 196,594,178 196,651,486 RGD:6480464
G Bcl2 BCL2, apoptosis regulator JBrowse link 13 26,605,426 26,769,374 RGD:6480464
G Cat catalase JBrowse link 3 93,379,872 93,412,058 RGD:6480464
G Ccl2 C-C motif chemokine ligand 2 JBrowse link 10 69,412,065 69,413,863 RGD:6480464
G Ccnd1 cyclin D1 JBrowse link 1 218,090,750 218,100,447 RGD:6480464
G Ccnd2 cyclin D2 JBrowse link 4 159,674,885 159,697,207 RGD:6480464
G Cxcl10 C-X-C motif chemokine ligand 10 JBrowse link 14 17,210,733 17,212,930 RGD:6480464
G Cybb cytochrome b-245 beta chain JBrowse link X 14,578,330 14,610,049 RGD:6480464
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 JBrowse link 8 62,472,087 62,478,122 RGD:6480464
G Egfr epidermal growth factor receptor JBrowse link 14 99,919,485 100,104,136 RGD:6480464
G Esr2 estrogen receptor 2 JBrowse link 6 99,163,953 99,214,711 RGD:6480464
G G6pd glucose-6-phosphate dehydrogenase JBrowse link X 156,274,800 156,293,935 RGD:6480464
G Gli1 GLI family zinc finger 1 JBrowse link 7 70,620,794 70,633,171 RGD:6480464
G Hlcs holocarboxylase synthetase JBrowse link 11 34,357,372 34,537,798 RGD:6480464
G Ifng interferon gamma JBrowse link 7 61,337,383 61,341,419 RGD:6480464
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:6480464
G Il4 interleukin 4 JBrowse link 10 38,963,979 38,969,531 RGD:6480464
G Il6 interleukin 6 JBrowse link 4 3,043,231 3,047,807 RGD:6480464
G Lct lactase JBrowse link 13 44,998,414 45,040,593 RGD:6480464
G Mapk1 mitogen activated protein kinase 1 JBrowse link 11 88,203,863 88,273,301 RGD:6480464
G Mapk3 mitogen activated protein kinase 3 JBrowse link 1 198,192,773 198,198,975 RGD:6480464
G Mapk7 mitogen-activated protein kinase 7 JBrowse link 10 47,768,592 47,775,130 RGD:6480464
G Myh7 myosin heavy chain 7 JBrowse link 15 33,605,769 33,657,761 RGD:6480464
G Nox4 NADPH oxidase 4 JBrowse link 1 150,796,359 150,976,186 RGD:6480464
G Nppa natriuretic peptide A JBrowse link 5 164,808,407 164,809,716 RGD:6480464
G Orai1 ORAI calcium release-activated calcium modulator 1 JBrowse link 12 38,981,903 38,995,570 RGD:6480464
G Pde5a phosphodiesterase 5A JBrowse link 2 226,899,604 227,044,916 RGD:6480464
G Ppp1r12a protein phosphatase 1, regulatory subunit 12A JBrowse link 7 51,404,971 51,515,382 RGD:6480464
G Ptgs1 prostaglandin-endoperoxide synthase 1 JBrowse link 3 15,560,685 15,582,339 RGD:6480464
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link 13 67,351,230 67,356,920 RGD:6480464
G Rela RELA proto-oncogene, NF-kB subunit JBrowse link 1 220,992,770 221,003,249 RGD:6480464
G Rhoa ras homolog family member A JBrowse link 8 117,082,440 117,116,244 RGD:6480464
G Shh sonic hedgehog signaling molecule JBrowse link 4 718,538 727,691 RGD:6480464
G Slc22a1 solute carrier family 22 member 1 JBrowse link 1 48,273,639 48,300,645 RGD:6480464
G Slc22a12 solute carrier family 22 member 12 JBrowse link 1 221,910,787 221,919,277 RGD:6480464
G Slc22a4 solute carrier family 22 member 4 JBrowse link 10 39,334,972 39,373,508 RGD:6480464
G Slc22a5 solute carrier family 22 member 5 JBrowse link 10 39,201,101 39,228,090 RGD:6480464
G Slc22a6 solute carrier family 22 member 6 JBrowse link 1 224,824,809 224,833,284 RGD:6480464
G Slc2a9 solute carrier family 2 member 9 JBrowse link 14 77,067,537 77,192,702 RGD:6480464
G Slc5a1 solute carrier family 5 member 1 JBrowse link 14 82,910,448 82,975,303 RGD:6480464
G Sod2 superoxide dismutase 2 JBrowse link 1 47,914,757 47,921,587 RGD:6480464
G Tgfa transforming growth factor alpha JBrowse link 4 117,961,877 118,045,923 RGD:6480464
G Tgfb1 transforming growth factor, beta 1 JBrowse link 1 82,480,875 82,497,196 RGD:6480464
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:6480464
G Tp53 tumor protein p53 JBrowse link 10 56,186,299 56,198,449 RGD:6480464
G Tug1 taurine up-regulated 1 JBrowse link 14 83,878,757 83,885,791 RGD:6480464
G Ugt1a1 UDP glucuronosyltransferase family 1 member A1 JBrowse link 9 95,295,701 95,302,822 RGD:6480464
G Umod uromodulin JBrowse link 1 189,186,027 189,199,939 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19716
    role 19663
      chemical role 19171
        antioxidant 14106
          trans-resveratrol 58
            (+)-trans-epsilon-viniferin 0
            (-)-trans-epsilon-viniferin 7
            (2R,3R)-trans-delta-viniferin 0
            (2R,3S)-trans-epsilon-viniferin 0
            (2S,3R)-trans-epsilon-viniferin 0
            (2S,3S)-trans-delta-viniferin 0
            (E)-trans-miyabenol C 0
            3-methoxy-4',5-dihydroxy-trans-stilbene 0
            resveratrol-3-O-sulfate 0
            trans-diptoindonesin B 0
            trans-piceid 52
Path 2
Term Annotations click to browse term
  CHEBI ontology 19716
    subatomic particle 19712
      composite particle 19712
        hadron 19712
          baryon 19712
            nucleon 19712
              atomic nucleus 19712
                atom 19712
                  main group element atom 19598
                    p-block element atom 19598
                      carbon group element atom 19486
                        carbon atom 19480
                          organic molecular entity 19480
                            organic molecule 19402
                              organic cyclic compound 19158
                                organic aromatic compound 18984
                                  phenols 17984
                                    benzenediols 5300
                                      resorcinols 3639
                                        resveratrol 3187
                                          trans-resveratrol 58
                                            (+)-trans-epsilon-viniferin 0
                                            (-)-trans-epsilon-viniferin 7
                                            (2R,3R)-trans-delta-viniferin 0
                                            (2R,3S)-trans-epsilon-viniferin 0
                                            (2S,3R)-trans-epsilon-viniferin 0
                                            (2S,3S)-trans-delta-viniferin 0
                                            (E)-trans-miyabenol C 0
                                            3-methoxy-4',5-dihydroxy-trans-stilbene 0
                                            resveratrol-3-O-sulfate 0
                                            trans-diptoindonesin B 0
                                            trans-piceid 52
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.