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ONTOLOGY REPORT - ANNOTATIONS


Term:phenanthridines
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Accession:CHEBI:51245 term browser browse the term
Definition:Any dibenzopyridine based on the skeleton of phenanthridine and its substituted derivatives thereof.


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ethidium term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bcl2 BCL2, apoptosis regulator JBrowse link 13 26,605,426 26,769,374 RGD:6480464
G Ccnd1 cyclin D1 JBrowse link 1 218,090,750 218,100,447 RGD:6480464
G Ccne1 cyclin E1 JBrowse link 1 94,485,830 94,495,112 RGD:6480464
G Ccne2 cyclin E2 JBrowse link 5 24,434,077 24,446,406 RGD:6480464
G Cd59 CD59 molecule JBrowse link 3 94,010,481 94,028,660 RGD:6480464
G Gja1 gap junction protein, alpha 1 JBrowse link 20 37,876,650 37,889,097 RGD:6480464
G Il1a interleukin 1 alpha JBrowse link 3 121,824,712 121,836,122 RGD:6480464
G Mt-co1 mitochondrially encoded cytochrome c oxidase I JBrowse link MT 5,323 6,867 RGD:6480464
G Mt-co2 mitochondrially encoded cytochrome c oxidase II JBrowse link MT 7,006 7,689 RGD:6480464
G Mt-cyb mitochondrially encoded cytochrome b JBrowse link MT 14,136 15,278 RGD:6480464
G Mt-nd1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 JBrowse link MT 2,740 3,694 RGD:6480464
G Mt-nd4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 JBrowse link MT 10,160 11,537 RGD:6480464
G Nrf1 nuclear respiratory factor 1 JBrowse link 4 57,335,732 57,445,317 RGD:6480464
G P2rx7 purinergic receptor P2X 7 JBrowse link 12 39,353,613 39,396,042 RGD:6480464
G Slc22a1 solute carrier family 22 member 1 JBrowse link 1 48,273,639 48,300,645 RGD:6480464
G Slc22a2 solute carrier family 22 member 2 JBrowse link 1 48,318,025 48,360,219 RGD:6480464
G Slc22a3 solute carrier family 22 member 3 JBrowse link 1 48,433,079 48,521,261 RGD:6480464
G Tfam transcription factor A, mitochondrial JBrowse link 20 18,594,057 18,606,106 RGD:6480464
Narciclasine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Il6 interleukin 6 JBrowse link 4 3,043,231 3,047,807 RGD:6480464
G Mapk8 mitogen-activated protein kinase 8 JBrowse link 16 9,620,854 9,709,342 RGD:6480464
G Nfkbia NFKB inhibitor alpha JBrowse link 6 76,267,227 76,270,457 RGD:6480464
G Nos2 nitric oxide synthase 2 JBrowse link 10 66,188,290 66,221,621 RGD:6480464
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link 13 67,351,230 67,356,920 RGD:6480464
G Rela RELA proto-oncogene, NF-kB subunit JBrowse link 1 220,992,770 221,003,249 RGD:6480464
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:6480464
Nitidine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Top1 DNA topoisomerase I JBrowse link 3 156,635,688 156,717,686 RGD:6480464
G Top2a DNA topoisomerase II alpha JBrowse link 10 86,901,467 86,930,947 RGD:6480464
phenanthridone term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aifm1 apoptosis inducing factor, mitochondria associated 1 JBrowse link X 135,304,063 135,343,062 RGD:6480464
G Casp7 caspase 7 JBrowse link 1 277,190,557 277,242,779 RGD:6480464
G Casp9 caspase 9 JBrowse link 5 160,356,211 160,373,774 RGD:6480464
G Ccl3 C-C motif chemokine ligand 3 JBrowse link 10 70,869,516 70,871,066 RGD:6480464
G Cd83 CD83 molecule JBrowse link 17 24,416,651 24,435,790 RGD:6480464
G Cd86 CD86 molecule JBrowse link 11 67,060,305 67,117,990 RGD:6480464
G Cxcl2 C-X-C motif chemokine ligand 2 JBrowse link 14 18,731,346 18,733,391 RGD:6480464
G H2ax H2A.X variant histone JBrowse link 8 48,665,652 48,666,981 RGD:6480464
G Ifng interferon gamma JBrowse link 7 61,337,383 61,341,419 RGD:6480464
G Il10 interleukin 10 JBrowse link 13 47,738,933 47,743,392 RGD:6480464
G Il12b interleukin 12B JBrowse link 10 30,034,447 30,048,774 RGD:6480464
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:6480464
G Il2 interleukin 2 JBrowse link 2 123,847,150 123,851,854 RGD:6480464
G Kif18a kinesin family member 18A JBrowse link 3 100,366,168 100,426,867 RGD:6480464
G Kifc1 kinesin family member C1 JBrowse link 20 5,509,059 5,526,175 RGD:6480464
G Nos2 nitric oxide synthase 2 JBrowse link 10 66,188,290 66,221,621 RGD:6480464
G Parp1 poly (ADP-ribose) polymerase 1 JBrowse link 13 98,857,255 98,889,444 RGD:6480464
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link 13 67,351,230 67,356,920 RGD:6480464
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:6480464
G Txnrd1 thioredoxin reductase 1 JBrowse link 7 26,946,124 26,984,400 RGD:6480464
propidium term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ache acetylcholinesterase JBrowse link 12 22,472,358 22,477,052 RGD:6480464
G Bche butyrylcholinesterase JBrowse link 2 171,104,476 171,196,186 RGD:6480464
G Ccl2 C-C motif chemokine ligand 2 JBrowse link 10 69,412,065 69,413,863 RGD:6480464
G Ccl3 C-C motif chemokine ligand 3 JBrowse link 10 70,869,516 70,871,066 RGD:6480464
G Ccl4 C-C motif chemokine ligand 4 JBrowse link 10 70,870,926 70,886,357 RGD:6480464
G Ccl5 C-C motif chemokine ligand 5 JBrowse link 10 70,739,764 70,744,303 RGD:6480464
G Il6r interleukin 6 receptor JBrowse link 2 189,196,180 189,255,987 RGD:6480464
G Vegfa vascular endothelial growth factor A JBrowse link 9 17,340,341 17,355,681 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19790
    chemical entity 19789
      atom 19788
        nonmetal atom 19662
          nitrogen atom 18463
            nitrogen molecular entity 18463
              organonitrogen compound 18261
                organonitrogen heterocyclic compound 17259
                  dibenzopyridine 154
                    phenanthridines 51
                      (+)-2,7-Dideoxypancratistatin 0
                      (+)-Luguine 0
                      (-)-8-Demethylmaritidine 0
                      (6aR,12bS)-5,6,6a,7,8,12b-hexahydrobenzo[a]phenanthridine-10,11-diol 0
                      1-Epideacetylbowdensine 0
                      2-O-Acetylpseudolycorine 0
                      2-[(2,3-dimethyl-7,8,9,10-tetrahydrophenanthridin-6-yl)thio]-N-(4-methyl-1,2,5-oxadiazol-3-yl)acetamide 0
                      3-Methoxy-8,9-methylenedioxy-3,4-dihydrophenanthridine 0
                      5,6,6a,7,8,12b-hexahydrobenzo[a]phenanthridine-10,11-diol 0
                      5H-phenanthridine-6-thione 0
                      6-(1-azepanyl)phenanthridine 0
                      7-Deoxypancratistatin 0
                      Anhydrolycorinone 0
                      Assoanine 0
                      Carinatine 0
                      Crinasiadine 0
                      Crinasiatine 0
                      EDTA methidiumpropylamide 0
                      Kalbreclasine 0
                      LSM-3788 0
                      Lycoricidine 0
                      Narciclasine 7
                      Narcissidine 0
                      Nitidine 2
                      N~2~,N~2~-DIMETHYL-N~1~-(6-OXO-5,6-DIHYDROPHENANTHRIDIN-2-YL)GLYCINAMIDE 0
                      Oxoassoanine 0
                      Papyramine 0
                      Pseudolycorine 0
                      Trisphaeridine 0
                      Vasconine 0
                      Zephyramine 0
                      ethidium + 18
                      paritaprevir + 0
                      phenanthridine + 18
                      phenanthridone 20
                      propidium + 8
Path 2
Term Annotations click to browse term
  CHEBI ontology 19790
    subatomic particle 19788
      composite particle 19788
        hadron 19788
          baryon 19788
            nucleon 19788
              atomic nucleus 19788
                atom 19788
                  main group element atom 19674
                    p-block element atom 19674
                      carbon group element atom 19572
                        carbon atom 19561
                          organic molecular entity 19561
                            organic molecule 19483
                              organic cyclic compound 19246
                                organic heterocyclic compound 18366
                                  organic heteropolycyclic compound 17709
                                    organic heterotricyclic compound 14587
                                      dibenzopyridine 154
                                        phenanthridines 51
                                          (+)-2,7-Dideoxypancratistatin 0
                                          (+)-Luguine 0
                                          (-)-8-Demethylmaritidine 0
                                          (6aR,12bS)-5,6,6a,7,8,12b-hexahydrobenzo[a]phenanthridine-10,11-diol 0
                                          1-Epideacetylbowdensine 0
                                          2-O-Acetylpseudolycorine 0
                                          2-[(2,3-dimethyl-7,8,9,10-tetrahydrophenanthridin-6-yl)thio]-N-(4-methyl-1,2,5-oxadiazol-3-yl)acetamide 0
                                          3-Methoxy-8,9-methylenedioxy-3,4-dihydrophenanthridine 0
                                          5,6,6a,7,8,12b-hexahydrobenzo[a]phenanthridine-10,11-diol 0
                                          5H-phenanthridine-6-thione 0
                                          6-(1-azepanyl)phenanthridine 0
                                          7-Deoxypancratistatin 0
                                          Anhydrolycorinone 0
                                          Assoanine 0
                                          Carinatine 0
                                          Crinasiadine 0
                                          Crinasiatine 0
                                          EDTA methidiumpropylamide 0
                                          Kalbreclasine 0
                                          LSM-3788 0
                                          Lycoricidine 0
                                          Narciclasine 7
                                          Narcissidine 0
                                          Nitidine 2
                                          N~2~,N~2~-DIMETHYL-N~1~-(6-OXO-5,6-DIHYDROPHENANTHRIDIN-2-YL)GLYCINAMIDE 0
                                          Oxoassoanine 0
                                          Papyramine 0
                                          Pseudolycorine 0
                                          Trisphaeridine 0
                                          Vasconine 0
                                          Zephyramine 0
                                          ethidium + 18
                                          paritaprevir + 0
                                          phenanthridine + 18
                                          phenanthridone 20
                                          propidium + 8
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.