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ONTOLOGY REPORT - ANNOTATIONS


Term:3-dehydrocarnitine
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Accession:CHEBI:57885 term browser browse the term
Definition:An ammonium betaine that is the conjugate base of 3-dehydrocarnitinium; major species at pH 7.3.
Synonyms:exact_synonym: 3-oxo-4-(trimethylazaniumyl)butanoate
 related_synonym: 3-oxo-4-(trimethylammonio)butanoate;   Formula=C7H13NO3;   InChI=1S/C7H13NO3/c1-8(2,3)5-6(9)4-7(10)11/h4-5H2,1-3H3;   InChIKey=YNOWULSFLVIUDH-UHFFFAOYSA-N;   SMILES=C[N+](C)(C)CC(=O)CC([O-])=O
 xref: Beilstein:5509427 "Beilstein";   HMDB:HMDB0012154
 xref_mesh: MESH:C103930
 xref: PMID:25037050 "Europe PMC";   PMID:4968678 "Europe PMC";   Reaxys:5509427 "Reaxys";   Wikipedia:3-Dehydrocarnitine
 cyclic_relationship: is_conjugate_base_of CHEBI:16758


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3-dehydrocarnitine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Idh2 isocitrate dehydrogenase (NADP(+)) 2 JBrowse link 1 141,874,354 141,893,674 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19716
    chemical entity 19714
      molecular entity 19711
        ion 15823
          organic ion 7897
            organic cation 7118
              quaternary ammonium ion 5061
                quaternary nitrogen compound 545
                  ammonium betaine 270
                    3-dehydrocarnitine 1
                      3-dehydrocarnityl CoA 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19716
    subatomic particle 19712
      composite particle 19712
        hadron 19712
          baryon 19712
            nucleon 19712
              atomic nucleus 19712
                atom 19712
                  main group element atom 19598
                    main group molecular entity 19598
                      s-block molecular entity 19361
                        hydrogen molecular entity 19350
                          hydrides 18280
                            inorganic hydride 17204
                              pnictogen hydride 17166
                                nitrogen hydride 17003
                                  ammonium 8225
                                    ammonium ion derivative 8220
                                      quaternary ammonium ion 5061
                                        quaternary nitrogen compound 545
                                          ammonium betaine 270
                                            3-dehydrocarnitine 1
                                              3-dehydrocarnityl CoA 0
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.