Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:lipoarabinomannan
go back to main search page
Accession:CHEBI:59524 term browser browse the term
Definition:A glycolipid comprising a glycosylphosphatidyl-myo-inositol-anchored lipoglycan; a virulence factor associated with Mycobacterium tuberculosis.
Synonyms:related_synonym: LAM;   LAMs;   lipoarabinomannans
 xref_mesh: MESH:C050016
 xref: PMID:12063260 "Europe PMC";   PMID:12368438 "Europe PMC";   PMID:18344361 "Europe PMC";   PMID:19004785 "Europe PMC";   PMID:7797482 "Europe PMC";   Wikipedia:Lipoarabinomannan


show annotations for term's descendants       view all columns           Sort by:
 
lipoarabinomannan term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Csf2 colony stimulating factor 2 JBrowse link 10 39,602,089 39,604,070 RGD:6480464
G Cxcr2 C-X-C motif chemokine receptor 2 JBrowse link 9 81,427,275 81,435,065 RGD:6480464
G Il12b interleukin 12B JBrowse link 10 30,034,447 30,048,774 RGD:6480464
G Irak1 interleukin-1 receptor-associated kinase 1 JBrowse link X 156,716,469 156,726,367 RGD:6480464
G Irak3 interleukin-1 receptor-associated kinase 3 JBrowse link 7 64,922,830 64,982,224 RGD:6480464
G Mmp9 matrix metallopeptidase 9 JBrowse link 3 161,413,410 161,421,473 RGD:6480464
G Nfkb1 nuclear factor kappa B subunit 1 JBrowse link 2 240,773,520 240,890,053 RGD:6480464
G Nfkbia NFKB inhibitor alpha JBrowse link 6 76,267,227 76,270,457 RGD:6480464
G Rel REL proto-oncogene, NF-kB subunit JBrowse link 14 108,490,794 108,517,582 RGD:6480464
G Traf6 TNF receptor associated factor 6 JBrowse link 3 91,252,829 91,271,607 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19754
    role 19701
      biological role 19700
        antigen 112
          lipoarabinomannan 10
Path 2
Term Annotations click to browse term
  CHEBI ontology 19754
    subatomic particle 19752
      composite particle 19752
        hadron 19752
          baryon 19752
            nucleon 19752
              atomic nucleus 19752
                atom 19752
                  main group element atom 19637
                    p-block element atom 19637
                      chalcogen 19340
                        oxygen atom 19301
                          oxygen molecular entity 19301
                            hydroxides 19053
                              oxoacid 18115
                                pnictogen oxoacid 9854
                                  phosphorus oxoacid 8676
                                    phosphoric acids 7345
                                      phosphoric acid 7345
                                        phosphoric acid derivative 6996
                                          phosphate 6996
                                            organic phosphate 6995
                                              phospholipid 288
                                                glycerophospholipid 196
                                                  glycerophosphoinositol 19
                                                    phosphatidylinositol 19
                                                      glycosylphosphatidylinositol 17
                                                        lipoarabinomannan 10
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.