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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:gamma-aminobutyric acid zwitterion
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Accession:CHEBI:59888 term browser browse the term
Definition:Zwitterionic form of gamma-aminobutyric acid having an anionic carboxy group and a protonated amino group.
Synonyms:exact_synonym: 4-azaniumylbutanoate
 related_synonym: 4-aminobutanoate;   4-ammoniobutanoate;   Formula=C4H9NO2;   InChI=1S/C4H9NO2/c5-3-1-2-4(6)7/h1-3,5H2,(H,6,7);   InChIKey=BTCSSZJGUNDROE-UHFFFAOYSA-N;   SMILES=[NH3+]CCCC([O-])=O
 xref: Gmelin:1041559
 cyclic_relationship: is_tautomer_of CHEBI:16865


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4-(trimethylammonio)butanoate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bbox1 gamma-butyrobetaine hydroxylase 1 multiple interactions ISO [BBOX1 protein co-treated with Ketoglutaric Acids] results in increased metabolism of gamma-butyrobetaine CTD PMID:21439360 NCBI chr 3:101,425,684...101,474,848
Ensembl chr 3:101,427,055...101,474,890
JBrowse link
G Idh2 isocitrate dehydrogenase (NADP(+)) 2 multiple interactions
increases abundance
ISO Triazines inhibits the reaction [IDH2 protein mutant form results in increased abundance of gamma-butyrobetaine] CTD PMID:27469509 NCBI chr 1:141,874,354...141,893,674
Ensembl chr 1:141,866,283...141,893,705
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19792
    chemical entity 19791
      molecular entity 19787
        polyatomic entity 19697
          molecule 19515
            organic molecule 19483
              dipolar compound 1022
                zwitterion 1021
                  amino acid zwitterion 745
                    gamma-aminobutyric acid zwitterion 2
                      4-(trimethylammonio)butanoate 2
Path 2
Term Annotations click to browse term
  CHEBI ontology 19792
    subatomic particle 19788
      composite particle 19788
        hadron 19788
          baryon 19788
            nucleon 19788
              atomic nucleus 19788
                atom 19788
                  main group element atom 19675
                    p-block element atom 19675
                      carbon group element atom 19571
                        carbon atom 19560
                          organic molecular entity 19560
                            organic molecule 19483
                              dipolar compound 1022
                                zwitterion 1021
                                  amino acid zwitterion 745
                                    gamma-aminobutyric acid zwitterion 2
                                      4-(trimethylammonio)butanoate 2
paths to the root

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