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ONTOLOGY REPORT - ANNOTATIONS


Term:beta-D-GlcA3S-(1->3)-beta-D-Gal-(1->4)-D-GlcNAc
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Accession:CHEBI:60322 term browser browse the term
Definition:An amino trisaccharide consisting of a 3-O-sulfo-beta-D-glucuronic acid residue, a D-galactosyl residue and an N-acetyl-D-glucosamine residue (at the reducing end) in a linear sequence.
Synonyms:exact_synonym: 3-O-sulfo-beta-D-glucopyranuronosyl-(1->3)-beta-D-galactopyranosyl-(1->4)-2-acetamido-2-deoxy-D-glucopyranose
 related_synonym: 3-O-sulfo-beta-D-GlcA-(1->3)-beta-D-Gal-(1->4)-D-GlcNAc;   3-O-sulfo-beta-D-GlcpA-(1->3)-beta-D-Galp-(1->4)-D-GlcpNAc;   Formula=C20H33NO20S;   GlcA3Sbeta1-3Galbeta1-4GlcNAc;   HNK-1 carbohydrate epitope;   InChI=1S/C20H33NO20S/c1-4(24)21-7-9(26)13(6(3-23)36-18(7)32)38-19-11(28)14(8(25)5(2-22)37-19)39-20-12(29)15(41-42(33,34)35)10(27)16(40-20)17(30)31/h5-16,18-20,22-23,25-29,32H,2-3H2,1H3,(H,21,24)(H,30,31)(H,33,34,35)/t5-,6-,7-,8+,9-,10+,11-,12-,13-,14+,15+,16+,18?,19+,20-/m1/s1;   InChIKey=AKXIYZBZYOTHPH-SKSRJFFGSA-N;   SMILES=CC(=O)N[C@H]1C(O)O[C@H](CO)[C@@H](O[C@@H]2O[C@H](CO)[C@H](O)[C@H](O[C@@H]3O[C@@H]([C@@H](O)[C@H](OS(O)(=O)=O)[C@H]3O)C(O)=O)[C@H]2O)[C@@H]1O;   beta-D-GlcpA3S-(1->3)-beta-D-Galp-(1->4)-D-GlcpNAc;   human natural killer-1 carbohydrate epitope
 xref: GlyTouCan:G54406UD;   PMID:12383500 "Europe PMC";   PMID:12472892 "Europe PMC";   PMID:16897771 "Europe PMC";   PMID:17935701 "Europe PMC";   PMID:28403522 "Europe PMC";   PMID:8798480 "Europe PMC"
 cyclic_relationship: is_conjugate_acid_of CHEBI:137065


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  CHEBI ontology 19764
    role 19711
      chemical role 19227
        catalyst 7960
          sulfuric acid 7920
            sulfuric acid derivative 7920
              organic sulfate 1811
                carbohydrate sulfate 1282
                  oligosaccharide sulfate 2
                    beta-D-GlcA3S-(1->3)-beta-D-Gal-(1->4)-D-GlcNAc 0
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  CHEBI ontology 19764
    subatomic particle 19762
      composite particle 19762
        hadron 19762
          baryon 19762
            nucleon 19762
              atomic nucleus 19762
                atom 19762
                  main group element atom 19646
                    p-block element atom 19646
                      chalcogen 19350
                        oxygen atom 19311
                          oxygen molecular entity 19311
                            hydroxides 19062
                              oxoacid 18124
                                chalcogen oxoacid 11409
                                  sulfur oxoacid 11001
                                    sulfuric acid 7920
                                      sulfuric acid derivative 7920
                                        sulfates 7917
                                          organic sulfate 1811
                                            carbohydrate sulfate 1282
                                              oligosaccharide sulfate 2
                                                beta-D-GlcA3S-(1->3)-beta-D-Gal-(1->4)-D-GlcNAc 0
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.