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ONTOLOGY REPORT - ANNOTATIONS


Term:chrysobactin
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Accession:CHEBI:61345 term browser browse the term
Definition:A catechol-type siderophore with a structure of D-lysyl-L-serine substituted on N(2) of the lysyl residue by a 2,3-dihydroxybenzoyl group. It is produced by the Gram-negative bacillus Dickeya dadantii (previously known as Erwinia chrysanthem). Only the catecholate hydroxyl groups participate in metal coordination, so chrysobactin cannot provide full 1:1 coordination of Fe(III); at neutral pH and concentrations of about 0.1 mM, ferric chrysobactin exists as a mixture of bis and tris complexes.
Synonyms:exact_synonym: N(2)-(2,3-dihydroxybenzoyl)-D-lysyl-L-serine
 related_synonym: 2-(2,3-dihydroxybenzoyl)-D-lysyl-L-serine;   Formula=C16H23N3O7;   InChI=1S/C16H23N3O7/c17-7-2-1-5-10(15(24)19-11(8-20)16(25)26)18-14(23)9-4-3-6-12(21)13(9)22/h3-4,6,10-11,20-22H,1-2,5,7-8,17H2,(H,18,23)(H,19,24)(H,25,26)/t10-,11+/m1/s1;   InChIKey=NNTXFOAPABMVEG-MNOVXSKESA-N;   SMILES=NCCCC[C@@H](NC(=O)c1cccc(O)c1O)C(=O)N[C@@H](CO)C(O)=O
 xref: CAS:120124-51-8 "ChemIDplus";   MetaCyc:CPD-12582;   PMCID:PMC207143 "Europe PMC";   PMID:12231882 "Europe PMC";   PMID:1392469 "Europe PMC";   PMID:1787788 "Europe PMC";   PMID:18803373 "Europe PMC";   PMID:8837459 "Europe PMC"


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Term Annotations click to browse term
  CHEBI ontology 19734
    role 19680
      biological role 19678
        biochemical role 19177
          cofactor 15390
            siderophore 215
              chrysobactin 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19734
    subatomic particle 19730
      composite particle 19730
        hadron 19730
          baryon 19730
            nucleon 19730
              atomic nucleus 19730
                atom 19730
                  main group element atom 19614
                    p-block element atom 19614
                      carbon group element atom 19506
                        carbon atom 19500
                          organic molecular entity 19500
                            organic group 18414
                              organic divalent group 18406
                                organodiyl group 18406
                                  carbonyl group 18295
                                    carbonyl compound 18295
                                      carboxylic acid 17963
                                        carboacyl group 17074
                                          univalent carboacyl group 17074
                                            carbamoyl group 16804
                                              carboxamide 16804
                                                peptide 9318
                                                  oligopeptide 1076
                                                    dipeptide 255
                                                      chrysobactin 0
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