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ONTOLOGY REPORT - ANNOTATIONS


Term:all-trans-retinyl ester
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Accession:CHEBI:63410 term browser browse the term
Definition:A retintinyl ester in which all double bonds of the retinyl side-chain have trans-configuration.
Synonyms:related_synonym: Formula=C21H29O2R;   SMILES=CC(\\C=C\\C=C(C)\\C=C\\C1=C(C)CCCC1(C)C)=C/COC([*])=O;   an all-trans-retinyl ester
 xref: HMDB:HMDB0003598;   KEGG:C02075;   MetaCyc:All-trans-Retinyl-Esters;   PMID:12741839 "Europe PMC";   PMID:16116091 "SUBMITTER";   PMID:19490105 "SUBMITTER"


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all-trans-retinyl palmitate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cat catalase JBrowse link 3 93,379,872 93,412,058 RGD:6480464
G Ep300 E1A binding protein p300 JBrowse link 7 122,818,194 122,889,055 RGD:6480464
G Il10 interleukin 10 JBrowse link 13 47,738,933 47,743,392 RGD:6480464
G Il1rn interleukin 1 receptor antagonist JBrowse link 3 1,449,778 1,468,624 RGD:6480464
G Lipe lipase E, hormone sensitive type JBrowse link 1 82,248,031 82,266,727 RGD:6480464
G Mmp9 matrix metallopeptidase 9 JBrowse link 3 161,413,410 161,421,473 RGD:6480464
G Plin3 perilipin 3 JBrowse link 9 10,769,739 10,781,659 RGD:6480464
G Pnpla4 patatin like phospholipase domain containing 4 JBrowse link X 45,519,406 45,522,988 RGD:6480464
G Rara retinoic acid receptor, alpha JBrowse link 10 86,838,819 86,884,224 RGD:6480464
G Scarb1 scavenger receptor class B, member 1 JBrowse link 12 36,694,952 36,761,445 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19748
    chemical entity 19746
      group 19653
        inorganic group 19135
          oxo group 18306
            organic oxo compound 18306
              carbonyl compound 18306
                carboxylic ester 13987
                  retinyl ester 10
                    all-trans-retinyl ester 10
                      all-trans-retinyl dodecanoate 0
                      all-trans-retinyl heptanoate 0
                      all-trans-retinyl octanoate 0
                      all-trans-retinyl palmitate 10
                      all-trans-retinyl tetradecanoate 0
                      vitamin A + 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19748
    subatomic particle 19744
      composite particle 19744
        hadron 19744
          baryon 19744
            nucleon 19744
              atomic nucleus 19744
                atom 19744
                  main group element atom 19628
                    main group molecular entity 19628
                      s-block molecular entity 19393
                        hydrogen molecular entity 19382
                          hydrides 18296
                            organic hydride 17570
                              organic fundamental parent 17570
                                hydrocarbon 16994
                                  terpene 9333
                                    diterpene 8270
                                      diterpenoid 8270
                                        retinoid 7828
                                          retinol 279
                                            all-trans-retinol 279
                                              all-trans-retinyl ester 10
                                                all-trans-retinyl dodecanoate 0
                                                all-trans-retinyl heptanoate 0
                                                all-trans-retinyl octanoate 0
                                                all-trans-retinyl palmitate 10
                                                all-trans-retinyl tetradecanoate 0
                                                vitamin A + 0
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.