Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   


Term:ginsenoside Rf
go back to main search page
Accession:CHEBI:67986 term browser browse the term
Definition:A ginsenoside found in Panax ginseng and Panax japonicus var. major that is dammarane which is substituted by hydroxy groups at the 3beta, 6alpha, 12beta and 20 pro-S positions, in which the hydroxy group at position 6 has been converted to the corresponding beta-D-glucopyranosyl-(1->2)-beta-D-glucopyranoside, and in which a double bond has been introduced at the 24-25 position.
Synonyms:exact_synonym: (beta,6alpha,12beta)-3,12,20-trihydroxydammar-24-en-6-yl 2-O-beta-D-glucopyranosyl-beta-D-glucopyranoside
 related_synonym: Formula=C42H72O14;   InChI=1S/C42H72O14/c1-20(2)10-9-13-42(8,52)21-11-15-40(6)28(21)22(45)16-26-39(5)14-12-27(46)38(3,4)35(39)23(17-41(26,40)7)53-37-34(32(50)30(48)25(19-44)55-37)56-36-33(51)31(49)29(47)24(18-43)54-36/h10,21-37,43-52H,9,11-19H2,1-8H3/t21-,22+,23-,24+,25+,26+,27-,28-,29+,30+,31-,32-,33+,34+,35-,36-,37+,39+,40+,41+,42-/m0/s1;   InChIKey=UZIOUZHBUYLDHW-XUBRWZAZSA-N;   Panaxoside RF;   SMILES=CC(C)=CCC[C@](C)(O)[C@H]1CC[C@]2(C)[C@@H]1[C@H](O)C[C@@H]1[C@@]3(C)CC[C@H](O)C(C)(C)[C@@H]3[C@H](C[C@@]21C)O[C@@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@H]1O[C@@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@H]1O
 alt_id: CHEBI:5360
 xref: CAS:52286-58-5 "ChemIDplus";   CAS:52286-58-5 "KEGG COMPOUND";   HMDB:HMDB0034745;   KEGG:C08945;   KNApSAcK:C00003519
 xref_mesh: MESH:C055328
 xref: MetaCyc:CPD-15441;   PMID:10823656 "Europe PMC";   PMID:11901233 "Europe PMC";   PMID:12479975 "Europe PMC";   PMID:16297877 "Europe PMC";   PMID:19513004 "Europe PMC";   PMID:20057152 "Europe PMC";   PMID:20580705 "Europe PMC";   PMID:21417387 "Europe PMC";   PMID:22031031 "Europe PMC";   PMID:24173574 "Europe PMC";   PMID:9593902 "Europe PMC";   PMID:9692222 "Europe PMC";   Patent:US2007224297;   Reaxys:5721199 "Reaxys"

show annotations for term's descendants       view all columns           Sort by:
ginsenoside Rf term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apoa1 apolipoprotein A1 JBrowse link 8 50,525,091 50,526,875 RGD:6480464
G Apoc3 apolipoprotein C3 JBrowse link 8 50,529,318 50,531,498 RGD:6480464
G Kcnh2 potassium voltage-gated channel subfamily H member 2 JBrowse link 4 7,355,066 7,387,282 RGD:6480464
G Ppara peroxisome proliferator activated receptor alpha JBrowse link 7 126,618,872 126,687,282 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19716
    role 19663
      biological role 19661
        biochemical role 19179
          apoptosis inducer 10830
            ginsenoside Rf 4
Path 2
Term Annotations click to browse term
  CHEBI ontology 19716
    subatomic particle 19712
      composite particle 19712
        hadron 19712
          baryon 19712
            nucleon 19712
              atomic nucleus 19712
                atom 19712
                  main group element atom 19598
                    p-block element atom 19598
                      carbon group element atom 19486
                        carbon atom 19480
                          organic molecular entity 19480
                            heteroorganic entity 19055
                              organochalcogen compound 18777
                                organooxygen compound 18689
                                  carbohydrates and carbohydrate derivatives 12088
                                    carbohydrate 12088
                                      monosaccharide 3881
                                        aldose 2384
                                          aldohexose 2023
                                            glucose 1983
                                              D-glucose 1983
                                                D-glucopyranose 1609
                                                  beta-D-glucose 1585
                                                    beta-D-glucoside 1389
                                                      ginsenoside Rf 4
paths to the root


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.