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ONTOLOGY REPORT - ANNOTATIONS


Term:rubiadin
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Accession:CHEBI:69533 term browser browse the term
Definition:A dihydroxyanthraquinone that is anthracene-9,10-dione substituted by hydroxy groups at positions 1 and 3 and a methyl group at position 2. It has been isolated from Rubia yunnanensis.
Synonyms:exact_synonym: 1,3-dihydroxy-2-methylanthracene-9,10-dione
 related_synonym: Formula=C15H10O4;   InChI=1S/C15H10O4/c1-7-11(16)6-10-12(13(7)17)15(19)9-5-3-2-4-8(9)14(10)18/h2-6,16-17H,1H3;   InChIKey=IRZTUXPRIUZXMP-UHFFFAOYSA-N;   SMILES=Cc1c(O)cc2C(=O)c3ccccc3C(=O)c2c1O
 alt_id: CHEBI:8906
 xref: CAS:117-02-2 "ChemIDplus";   CAS:117-02-2 "KEGG COMPOUND";   KEGG:C10402;   KNApSAcK:C00002862
 xref_mesh: MESH:C072500
 xref: PMID:10410466 "Europe PMC";   PMID:16213120 "Europe PMC";   PMID:19793347 "Europe PMC";   PMID:20965744 "Europe PMC";   PMID:21973054 "Europe PMC";   PMID:22822668 "Europe PMC";   PMID:24062780 "Europe PMC";   PMID:9425750 "Europe PMC";   Patent:KR20120033699;   Reaxys:1885558 "Reaxys"


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rubiadin term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Calcr calcitonin receptor JBrowse link 4 28,627,439 28,702,559 RGD:6480464
G Car2 carbonic anhydrase 2 JBrowse link 2 88,097,740 88,112,868 RGD:6480464
G Ctsk cathepsin K JBrowse link 2 196,655,469 196,666,447 RGD:6480464
G Nfkbia NFKB inhibitor alpha JBrowse link 6 76,267,227 76,270,457 RGD:6480464
G Tnfrsf11b TNF receptor superfamily member 11B JBrowse link 7 93,798,580 93,826,586 RGD:6480464
G Tnfsf11 TNF superfamily member 11 JBrowse link 15 60,482,527 60,512,704 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19728
    role 19675
      chemical role 19189
        antioxidant 14093
          rubiadin 6
Path 2
Term Annotations click to browse term
  CHEBI ontology 19728
    subatomic particle 19724
      composite particle 19724
        hadron 19724
          baryon 19724
            nucleon 19724
              atomic nucleus 19724
                atom 19724
                  main group element atom 19610
                    p-block element atom 19610
                      carbon group element atom 19501
                        carbon atom 19494
                          organic molecular entity 19494
                            organic group 18413
                              organic divalent group 18404
                                organodiyl group 18404
                                  carbonyl group 18293
                                    carbonyl compound 18293
                                      ketone 15914
                                        cyclic ketone 13346
                                          quinone 8234
                                            acenoquinone 7420
                                              anthraquinone 466
                                                hydroxyanthraquinones 457
                                                  dihydroxyanthraquinone 318
                                                    rubiadin 6
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.