Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:9-HODE
go back to main search page
Accession:CHEBI:72651 term browser browse the term
Definition:A HODE that consists of (10E,12Z)-octadecadienoic acid with the hydroxy substituent located at position 9.
Synonyms:exact_synonym: (10E,12Z)-9-hydroxyoctadeca-10,12-dienoic acid
 related_synonym: (10E,12Z)-9-HODE;   9-hydroxy-10E,12Z-octadecadienoic acid;   9-hydroxy-trans-10,cis-12-octadecadienoic acid;   Formula=C18H32O3;   InChI=1S/C18H32O3/c1-2-3-4-5-6-8-11-14-17(19)15-12-9-7-10-13-16-18(20)21/h6,8,11,14,17,19H,2-5,7,9-10,12-13,15-16H2,1H3,(H,20,21)/b8-6-,14-11+;   InChIKey=NPDSHTNEKLQQIJ-ZJHFMPGASA-N;   SMILES=CCCCC\\C=C/C=C/C(O)CCCCCCCC(O)=O
 xref: LIPID_MAPS_instance:LMFA02000151
 xref_mesh: MESH:C024347
 xref: PMID:22790953;   PMID:24760997;   Reaxys:1914445
 cyclic_relationship: is_conjugate_acid_of CHEBI:133820


show annotations for term's descendants           Sort by:
 
9-HODE term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pparg peroxisome proliferator-activated receptor gamma increases expression ISO 9-hydroxy-10,12-octadecadienoic acid results in increased expression of PPARG CTD PMID:16647253 NCBI chr 4:147,274,055...147,399,383
Ensembl chr 4:147,274,107...147,399,380
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19787
    role 19734
      biological role 19734
        biochemical role 19282
          metabolite 19263
            eukaryotic metabolite 18908
              plant metabolite 17360
                9-HODE 1
                  9(R)-HODE 0
                  9(S)-HODE 0
                  9-oxo-ODE 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19787
    subatomic particle 19784
      composite particle 19784
        hadron 19784
          baryon 19784
            nucleon 19784
              atomic nucleus 19784
                atom 19784
                  main group element atom 19672
                    p-block element atom 19672
                      carbon group element atom 19574
                        carbon atom 19563
                          organic molecular entity 19563
                            organic group 18495
                              organic divalent group 18488
                                organodiyl group 18488
                                  carbonyl group 18391
                                    carbonyl compound 18391
                                      carboxylic acid 18061
                                        monocarboxylic acid 17407
                                          fatty acid 15845
                                            unsaturated fatty acid 922
                                              polyunsaturated fatty acid 663
                                                HODE 3
                                                  9-HODE 1
                                                    9(R)-HODE 0
                                                    9(S)-HODE 0
                                                    9-oxo-ODE 0
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.