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ONTOLOGY REPORT - ANNOTATIONS


Term:thioflavine T
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Accession:CHEBI:76023 term browser browse the term
Definition:An organic chloride salt having 2-[4-(dimethylamino)phenyl]-3,6-dimethyl-1,3-benzothiazol-3-ium as the counterion. It is widely used to visualise and quantify the presence of amyloids, both in vitro and in vivo.
Synonyms:exact_synonym: 2-[4-(dimethylamino)phenyl]-3,6-dimethyl-1,3-benzothiazol-3-ium chloride
 related_synonym: 2-(4-(Dimethylamino)phenyl)-3,6-dimethylbenzothiazolium chloride;   C.I. 49005;   C.I. Basic Yellow 1;   Formula=C17H19ClN2S;   InChI=1S/C17H19N2S.ClH/c1-12-5-10-15-16(11-12)20-17(19(15)4)13-6-8-14(9-7-13)18(2)3;/h5-11H,1-4H3;1H/q+1;/p-1;   InChIKey=JADVWWSKYZXRGX-UHFFFAOYSA-M;   SMILES=C=1(C=2C=CC(N(C)C)=CC2)SC=3C=C(C)C=CC3[N+]1C.[Cl-];   ThT;   Thioflavin T;   basic yellow 1
 alt_id: CHEBI:88013
 xref: CAS:2390-54-7 "ChemIDplus"
 xref_mesh: MESH:C009462
 xref: PMID:22976818 "Europe PMC";   PMID:23069995 "Europe PMC";   PMID:23151310 "Europe PMC";   PMID:23215453 "Europe PMC";   PMID:23454128 "Europe PMC";   PMID:23458420 "Europe PMC";   PMID:23479447 "Europe PMC";   PMID:23517370 "Europe PMC";   PMID:23662608 "Europe PMC";   PMID:23747341 "Europe PMC";   PMID:23807235 "Europe PMC";   PMID:23844566 "Europe PMC";   PMID:23903702 "Europe PMC";   PMID:23909872 "Europe PMC";   PMID:23934820 "Europe PMC";   PMID:24002823 "Europe PMC";   PMID:25483916 "Europe PMC";   PMID:25712665 "Europe PMC";   PMID:25794693 "Europe PMC";   PMID:26087242 "Europe PMC";   Patent:WO2006006172;   Patent:WO2007011834;   Reaxys:3922452 "Reaxys";   Wikipedia:Thioflavin_T


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thioflavine T term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ache acetylcholinesterase JBrowse link 12 22,472,358 22,477,052 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19741
    role 19688
      application 19339
        dye 1271
          histological dye 140
            thioflavine T 1
Path 2
Term Annotations click to browse term
  CHEBI ontology 19741
    subatomic particle 19737
      composite particle 19737
        hadron 19737
          baryon 19737
            nucleon 19737
              atomic nucleus 19737
                atom 19737
                  main group element atom 19622
                    p-block element atom 19622
                      halogen 17759
                        chlorine atom 17494
                          chlorine molecular entity 17494
                            elemental chlorine 8362
                              monoatomic chlorine 8343
                                chloride 8343
                                  chloride salt 8343
                                    organic chloride salt 651
                                      thioflavine T 1
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