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Term:1-O-palmitoyl-2-O-(5-oxovaleryl)-sn-glycero-3-phosphocholine
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Accession:CHEBI:77890 term browser browse the term
Definition:A 1,2-diacyl-sn-glycero-3-phosphocholine having palmitoyl and 5-oxovaleryl groups at the 1- and 2-positions respectively; major species at pH 7.3.
Synonyms:exact_synonym: (2R)-3-(hexadecanoyloxy)-2-[(5-oxopentanoyl)oxy]propyl 2-(trimethylazaniumyl)ethyl phosphate
 related_synonym: (2R)-2-[(5-oxopentanoyl)oxy]-3-(palmitoyloxy)propyl 2-(trimethylammonio)ethyl phosphate;   1-Palmitoyl-2-(5-oxovaleroyl)-sn-glycero-3-phosphorylcholine;   1-hexadecanoyl-2-(5-oxopentanoyl)-sn-glycero-3-phosphocholine;   1-hexadecanoyl-2-(5-oxopentanoyl)-sn-glycero-3-phosphocholine zwitterion;   1-hexadecanoyl-2-(5-oxovaleroyl)-sn-glycero-3-phosphocholine;   Formula=C29H56NO9P;   InChI=1S/C29H56NO9P/c1-5-6-7-8-9-10-11-12-13-14-15-16-17-20-28(32)36-25-27(39-29(33)21-18-19-23-31)26-38-40(34,35)37-24-22-30(2,3)4/h23,27H,5-22,24-26H2,1-4H3/t27-/m1/s1;   InChIKey=RKIDALSACBQVTN-HHHXNRCGSA-N;   PC(16:0/5:0(CHO));   POVPC;   SMILES=CCCCCCCCCCCCCCCC(=O)OC[C@H](COP([O-])(=O)OCC[N+](C)(C)C)OC(=O)CCCC=O
 alt_id: MESH:C400184
 xref: LIPID_MAPS_instance:LMGP20010005 "LIPID MAPS"
 xref_mesh: MESH:C400184
 xref: PMID:16386258 "Europe PMC";   PMID:16904371 "Europe PMC";   PMID:22958747 "Europe PMC";   PMID:23936132 "Europe PMC";   PMID:24079413 "Europe PMC";   PMID:24890951 "Europe PMC";   Reaxys:15471652 "Reaxys"
 cyclic_relationship: is_conjugate_base_of CHEBI:60319


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1-O-palmitoyl-2-O-(5-oxovaleryl)-sn-glycero-3-phosphocholine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Agtr1a angiotensin II receptor, type 1a JBrowse link 17 35,907,102 35,958,136 RGD:6480464
G Alox5 arachidonate 5-lipoxygenase JBrowse link 4 148,398,004 148,446,308 RGD:6480464
G Ccr2 C-C motif chemokine receptor 2 RGD:6480464
G Cd68 Cd68 molecule JBrowse link 10 56,268,726 56,270,605 RGD:6480464
G Crp C-reactive protein JBrowse link 13 91,080,448 91,081,358 RGD:6480464
G Gja1 gap junction protein, alpha 1 JBrowse link 20 37,876,650 37,889,097 RGD:6480464
G Il1a interleukin 1 alpha JBrowse link 3 121,824,712 121,836,122 RGD:6480464
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:6480464
G Kcnab2 potassium voltage-gated channel subfamily A regulatory beta subunit 2 JBrowse link 5 169,570,327 169,658,875 RGD:6480464
G Mapk1 mitogen activated protein kinase 1 JBrowse link 11 88,203,863 88,273,301 RGD:6480464
G Mapk3 mitogen activated protein kinase 3 JBrowse link 1 198,192,773 198,198,975 RGD:6480464
G Olr1 oxidized low density lipoprotein receptor 1 JBrowse link 4 163,239,853 163,261,937 RGD:6480464
G Ptafr platelet-activating factor receptor JBrowse link 5 150,746,284 150,775,675 RGD:6480464
G Ptgs1 prostaglandin-endoperoxide synthase 1 JBrowse link 3 15,560,685 15,582,339 RGD:6480464
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link 13 67,351,230 67,356,920 RGD:6480464
G Sele selectin E JBrowse link 13 82,355,234 82,365,323 RGD:6480464
G Src SRC proto-oncogene, non-receptor tyrosine kinase JBrowse link 3 153,547,807 153,595,643 RGD:6480464
G Timp4 TIMP metallopeptidase inhibitor 4 JBrowse link 4 147,156,948 147,163,467 RGD:6480464
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19734
    role 19680
      biological role 19678
        biochemical role 19177
          apoptosis inducer 10837
            1-O-palmitoyl-2-O-(5-oxovaleryl)-sn-glycero-3-phosphocholine 19
Path 2
Term Annotations click to browse term
  CHEBI ontology 19734
    subatomic particle 19730
      composite particle 19730
        hadron 19730
          baryon 19730
            nucleon 19730
              atomic nucleus 19730
                atom 19730
                  main group element atom 19614
                    p-block element atom 19614
                      chalcogen 19323
                        oxygen atom 19284
                          oxygen molecular entity 19284
                            hydroxides 19042
                              oxoacid 18106
                                pnictogen oxoacid 9849
                                  phosphorus oxoacid 8671
                                    phosphoric acids 7340
                                      phosphoric acid 7340
                                        phosphoric acid derivative 6991
                                          phosphate 6991
                                            organic phosphate 6990
                                              phospholipid 288
                                                glycerophospholipid 196
                                                  glycerophosphocholine 115
                                                    phosphatidylcholine 81
                                                      1,2-diacyl-sn-glycero-3-phosphocholine 23
                                                        1-O-palmitoyl-2-O-(5-oxovaleryl)-sn-glycero-3-phosphocholine 19
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.