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ONTOLOGY REPORT - ANNOTATIONS


Term:acridine orange free base
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Accession:CHEBI:87346 term browser browse the term
Definition:A member of the class of aminoacridines that is acridine carrying two dimethylamino substituents at positions 3 and 6. The hydrochloride salt is the fluorescent dye 'acridine orange', used for cell cycle determination.
Synonyms:exact_synonym: N(3),N(3),N(6),N(6)-tetramethylacridine-3,6-diamine
 related_synonym: 3,6-Bis(dimethylamino)acridine;   3,6-Di(dimethylamino)acridine;   Acridine Orange;   Acridine Orange Base;   Brilliant Acridine Orange E;   C.I. 46005B;   C.I. Solvent Orange 15;   Formula=C17H19N3;   InChI=1S/C17H19N3/c1-19(2)14-7-5-12-9-13-6-8-15(20(3)4)11-17(13)18-16(12)10-14/h5-11H,1-4H3;   InChIKey=DPKHZNPWBDQZCN-UHFFFAOYSA-N;   N,N,N',N'-Tetramethyl-3,6-acridinediamine;   SMILES=CN(C)c1ccc2cc3ccc(cc3nc2c1)N(C)C;   Solvent Orange 15
 xref: CAS:494-38-2 "ChemIDplus"
 xref_mesh: MESH:D000165
 xref: PMID:24988915 "Europe PMC";   PMID:25025314 "Europe PMC";   PMID:25542136 "Europe PMC";   PMID:26016416 "Europe PMC";   PMID:26034308 "Europe PMC";   PMID:26163789 "Europe PMC";   Reaxys:20916 "Reaxys";   Wikipedia:Acridine_orange


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acridine orange free base term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bax BCL2 associated X, apoptosis regulator JBrowse link 1 101,451,801 101,457,207 RGD:6480464
G Gstp1 glutathione S-transferase pi 1 JBrowse link 1 219,291,679 219,294,147 RGD:6480464
G Tp53 tumor protein p53 JBrowse link 10 56,186,299 56,198,449 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19754
    role 19701
      application 19353
        dye 1279
          histological dye 142
            acridine orange free base 3
Path 2
Term Annotations click to browse term
  CHEBI ontology 19754
    subatomic particle 19752
      composite particle 19752
        hadron 19752
          baryon 19752
            nucleon 19752
              atomic nucleus 19752
                atom 19752
                  main group element atom 19637
                    p-block element atom 19637
                      carbon group element atom 19528
                        carbon atom 19517
                          organic molecular entity 19517
                            organic molecule 19436
                              organic cyclic compound 19199
                                organic heterocyclic compound 18276
                                  organic heteropolycyclic compound 17583
                                    organic heterotricyclic compound 13744
                                      dibenzopyridine 150
                                        acridines 112
                                          aminoacridines 17
                                            acridine orange free base 3
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