Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:serpentine
go back to main search page
Accession:CHEBI:9119 term browser browse the term
Definition:An indole alkaloid that is 18-oxayohimban dehydrogenated at positions 3, 4, 5, 6, 16 and 17 and substituted by a methyl group at the 19alpha position and by a methoxycarbonyl group at position 16.
Synonyms:exact_synonym: methyl (19alpha)-19-methyl-3,4,5,6,16,17-hexadehydro-18-oxayohimban-4-ium-1-ide-16-carboxylate
 related_synonym: (19alpha)-3,4,5,6,16,17-hexadehydro-16-(methoxycarbonyl)-19-methyloxayohimbanium;   (4S,4aR,14aS)-4-methyl-1-[(methyloxy)carbonyl]-4a,5,14,14a-tetrahydro-4H-indolo[2,3-a]pyrano[3,4-g]quinolizin-6-ium-13-ide;   Formula=C21H20N2O3;   InChI=1S/C21H20N2O3/c1-12-16-10-23-8-7-14-13-5-3-4-6-18(13)22-20(14)19(23)9-15(16)17(11-26-12)21(24)25-2/h3-8,11-12,15-16H,9-10H2,1-2H3/t12-,15-,16+/m0/s1;   InChIKey=WYTGDNHDOZPMIW-VBNZEHGJSA-N;   SMILES=[C@]12([C@@H](OC=C([C@]1(CC=3[N+](C2)=CC=C4C5=CC=CC=C5[N-]C34)[H])C(=O)OC)C)[H];   Serpentine (alkaloid);   methyl (19alpha)-19-methyl-3,4,5,6,16,17-hexadehydrooxayohimban-4-ium-1-ide-16-carboxylate
 xref: Beilstein:5421116 "Beilstein";   CAS:18786-24-8 "ChemIDplus";   CAS:18786-24-8 "KEGG COMPOUND";   KEGG:C09241;   KNApSAcK:C00001769
 xref_mesh: MESH:C009244
 cyclic_relationship: is_conjugate_base_of CHEBI:142531


show annotations for term's descendants       view all columns           Sort by:
 
serpentine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cyp2d22 cytochrome P450, family 2, subfamily d, polypeptide 22 JBrowse link 15 82,370,527 82,380,260 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 21264
    role 21247
      biological role 21245
        biochemical role 20289
          metabolite 20228
            alkaloid 5357
              indole alkaloid 1857
                serpentine 1
Path 2
Term Annotations click to browse term
  CHEBI ontology 21264
    subatomic particle 21260
      composite particle 21260
        hadron 21260
          baryon 21260
            nucleon 21260
              atomic nucleus 21260
                atom 21260
                  main group element atom 21128
                    main group molecular entity 21128
                      s-block molecular entity 20600
                        hydrogen molecular entity 20513
                          hydrides 19480
                            inorganic hydride 17587
                              pnictogen hydride 17538
                                nitrogen hydride 17352
                                  ammonium 8068
                                    ammonium ion derivative 8063
                                      quaternary ammonium ion 5196
                                        quaternary nitrogen compound 584
                                          iminium betaine 41
                                            serpentine 1
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.