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ONTOLOGY REPORT - ANNOTATIONS


Term:primary systemic mycosis
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Accession:DOID:0050292 term browser browse the term
Definition:A systemic mycosis that results_in infection located_in human body, has_material_basis_in Fungi, which can overcome the physiological and cellular defenses of the normal human host. The primary deep pathogens usually gain access to the host via the respiratory tract.
Synonyms:primary_id: RDO:9002531
For additional species annotation, visit the Alliance of Genome Resources.


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coccidioidomycosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G MBL2 mannose binding lectin 2 JBrowse link 10 52,764,977 52,772,847 RGD:4889458
histoplasmosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G IL17A interleukin 17A JBrowse link 6 52,186,375 52,190,638 RGD:9068939
paracoccidioidomycosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CCR5 C-C motif chemokine receptor 5 (gene/pseudogene) JBrowse link 3 46,370,142 46,376,206 RGD:4892087
G CD28 CD28 molecule JBrowse link 2 203,706,475 203,739,756 RGD:5131616
G CFB complement factor B JBrowse link 6 31,946,095 31,952,084 RGD:7421526
G HLA-DRB1 major histocompatibility complex, class II, DR beta 1 JBrowse link 6 32,578,769 32,589,836 RGD:5147631
G ICAM1 intercellular adhesion molecule 1 JBrowse link 19 10,271,120 10,286,615 RGD:8547589
G MMP2 matrix metallopeptidase 2 JBrowse link 16 55,478,830 55,506,691 RGD:8657058
G MMP9 matrix metallopeptidase 9 JBrowse link 20 46,008,908 46,016,561 RGD:8657058
G TNF tumor necrosis factor JBrowse link 6 31,575,565 31,578,336 RGD:7401182
Presumed Ocular Histoplasmosis Syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G HLA-B major histocompatibility complex, class I, B JBrowse link 6 31,353,875 31,357,179 RGD:7364917
sporotrichosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G TLR4 toll like receptor 4 JBrowse link 9 117,704,403 117,724,735 RGD:7794681

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 16491
    disease by infectious agent 829
      Bacterial Infections and Mycoses 567
        fungal infectious disease 72
          systemic mycosis 66
            primary systemic mycosis 12
              adiaspiromycosis 0
              allescheriosis 0
              blastomycosis 0
              coccidioidomycosis 1
              histoplasmosis + 2
              paracoccidioidomycosis + 8
              phaeohyphomycosis + 0
              sporotrichosis 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.